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Unravelling Hidden Trophic Interactions Among Sea Urchin Juveniles and Macroinvertebrates by DNA Amplification

Alberto Sutera; Chiara Bonaviri; Francesco Di Trapani; Francesca La Bella; Vesna Macic; Olivera Marković; Bernat Hereu; Roberto De Michele
Molecular Ecology · Vol. 34, Issue 24 · 2025

Abstract

Rocky reefs may shift between two distinct stable states: productive algal forests, characterised by high abundance and biodiversity of macrofauna, and impoverished barrens, dominated by overgrazing sea urchins. Barren states may persist despite the recovery of adult sea urchin predators, suggesting additional stabilising mechanisms. Sea urchin settlers equally colonise forests and barrens in large numbers, but in forests only a few of them reach adult size, suggesting that post‐settlement predation might play a crucial role in determining sea urchin population density. Visual assessment of predation events in the field is unfeasible due to the microscopic scale of both predators and prey and the complexity of the arena. In this study, we designed and tested specific primers for the detection of mtDNA of settlers of the Mediterranean sympatric sea urchin species Paracentrotus lividus and Arbacia lixula in the stomach content of macroinvertebrates. By testing 360 invertebrates collected in algal forests during an urchin settling event at five mtDNA loci, we identified 60 (17%) samples positive for P. lividus DNA. Presence of urchin DNA was confirmed by sequencing and NGS metabarcoding analyses. Our results suggest that predation by macroinvertebrates may represent an important process in controlling sea urchin population density and maintaining the forest state in temperate rocky reefs.

Bibliographic Information

JournalMolecular Ecology
PublisherWiley
Publication Date2025-12-01
Publication Year2025
Volume34
Issue24
Document TypeJournal Article
Print ISSN0962-1083
eISSN1365-294X
DOI10.1111/mec.70163
SubjectEcology & Organismal Biology

Access Information

NARA Access Coverage1997-01-01~Current
Journal Homepagehttps://onlinelibrary.wiley.com/loi/1365294X
Publisher PageOpen Publisher Page
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