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Journal Article

The Idiot's Guide to Effective Population Size

Robin S. Waples
Molecular Ecology · Vol. 34, Issue 23 · 2025

Abstract

This is a reference manual for the elegant, yet hideously complex concept of effective population size ( N e ), inspired by a classic, self‐published manual of automotive repair ‘for the compleat idiot’. The Guide is timely, given the recent Kunming‐Montreal Global Biodiversity Framework, where 196 Parties committed to tracking genetic diversity—and estimating N e —for all species. N e is a human construct, but a useful one that allows us to capture diverse aspects of an organism's biology in a single number. The Guide collates in one location factual information about effective population size, with a focus on topics of practical relevance to scientists and managers studying real populations; it covers definition, computation and estimation of effective size, both demographically and genetically. As appropriate, the reader is directed to other primary sources for more details. A ‘Don't Do These Things’ section lists several ill‐advised approaches to dealing with N e , and an Appendix provides useful tools and practical suggestions for interested users. A special section considers both possibilities and challenges presented by the genomics revolution. Availability of vast numbers of genetic markers increases precision, but less than some might think, and simultaneously introduces new challenges involving filtering and bioinformatics processing. As annotated genomes become more common for non‐model species, opportunities are opened to address qualitatively different questions, including reconstructing historical changes in N e through time.

Bibliographic Information

JournalMolecular Ecology
PublisherWiley
Publication Date2025-12-01
Publication Year2025
Volume34
Issue23
Document TypeJournal Article
Print ISSN0962-1083
eISSN1365-294X
DOI10.1111/mec.17670
SubjectEcology & Organismal Biology

Access Information

NARA Access Coverage1997-01-01~Current
Journal Homepagehttps://onlinelibrary.wiley.com/loi/1365294X
Publisher PageOpen Publisher Page
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