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EchoAI: A deep-learning based model for classification of echinoderms in global oceans

Zhinuo Zhou; Ge-Yi Fu; Yi Fang; Ye Yuan; Hong-Bin Shen; Chun-Sheng Wang; Xue-Wei Xu; Peng Zhou; Xiaoyong Pan
Frontiers in Marine Science · Vol. 10 · 2023

Abstract

Introduction In response to the need for automated classification in global marine biological studies, deep learning is applied to image-based classification of marine echinoderms. Methods Images of marine echinoderms are collected and classified according to their systematic taxonomy. The images belong to 5 classes, 38 orders, 145 families, 459 genera, and 1021 species, respectively. The deep learning model, EfficientNetV2, outperforms the competing model and is chosen for developing the automated classification tool, EchoAI. Then, the EfficientNetV2-based tool, EchoAI is applied to each taxonomic level. Results The accuracy for the test dataset was 0.980 (class), 0.876 (order), 0.738 (family), 0.612 (genus), and 0.469 (species), respectively. Online prediction service is provided. Discussion The EchoAI model and results are facilitated for investigating the diversity, abundance and distribution of species at the global scale, and the methodological strategy can also be applied to image classification of other categories of marine organisms, which is of great significance for global marine studies. EchoAI is freely available at http://www.csbio.sjtu.edu.cn/bioinf/EchoAI/ for academic use.

Bibliographic Information

JournalFrontiers in Marine Science
PublisherFrontiers
Publication Date2023-04-04
Publication Year2023
Volume10
Document TypeJournal Article
eISSN2296-7745
DOI10.3389/fmars.2023.1147690
SubjectMarine science; fisheries; aquaculture; pollution; ocean observation; policy

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NARA Access CoverageOA / free full text
Journal Homepagehttps://www.frontiersin.org/journals/marine-science
Publisher PageOpen Publisher Page
This article is openly available from the publisher.