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Journal Article

Order from entropy: big data from FAIR data cohorts in the digital age of plant breeding

Abhishek Gogna; Daniel Arend; Sebastian Beier; Ehsan Eyshi Rezaei; Tobias Würschum; Yusheng Zhao; Jianting Chu; Jochen C. Reif
Theoretical and Applied Genetics · Vol. 138, Issue 10 · 2025

Abstract

Lack of interoperable datasets in plant breeding research creates an innovation bottleneck, requiring additional effort to integrate diverse datasets—if access is possible at all. Handling of plant breeding data and metadata must, therefore, change toward adopting practices that promote openness, collaboration, standardization, ethical data sharing, sustainability, and transparency of provenance and methodology. FAIR Digital Objects, which build on research data infrastructures and FAIR principles, offer a path to address this interoperability crisis, yet their adoption remains in its infancy. In the present work, we identify data sharing practices in the plant breeding domain as Data Cohorts and establish their connection to FAIR Digital Objects. We further link these cohorts to broader research infrastructures and propose a Data Trustee model for federated data sharing. With this we aim to push the boundaries of data management, often viewed as the last step in plant breeding research, to an ongoing process to enable future innovations in the field.

Bibliographic Information

JournalTheoretical and Applied Genetics
PublisherSpringer
Publication Date2025-10-01
Publication Year2025
Volume138
Issue10
Document TypeJournal Article
Print ISSN0040-5752
eISSN1432-2242
DOI10.1007/s00122-025-05040-5

Access Information

NARA Access Coverage1929-01-01~Current
Journal Homepagehttps://www.springer.com/journal/122
Publisher PageOpen Publisher Page
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