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Journal Article

Integrating distance sampling and presence‐only data to estimate species abundance

Matthew T. Farr; David S. Green; Kay E. Holekamp; Elise F. Zipkin
Ecology · Vol. 102, Issue 1 · 2021

Abstract

Integrated models combine multiple data types within a unified analysis to estimate species abundance and covariate effects. By sharing biological parameters, integrated models improve the accuracy and precision of estimates compared to separate analyses of individual data sets. We developed an integrated point process model to combine presence‐only and distance sampling data for estimation of spatially explicit abundance patterns. Simulations across a range of parameter values demonstrate that our model can recover estimates of biological covariates, but parameter accuracy and precision varied with the quantity of each data type. We applied our model to a case study of black‐backed jackals in the Masai Mara National Reserve, Kenya, to examine effects of spatially varying covariates on jackal abundance patterns. The model revealed that jackals were positively affected by anthropogenic disturbance on the landscape, with highest abundance estimated along the Reserve border near human activity. We found minimal effects of landscape cover, lion density, and distance to water source, suggesting that human use of the Reserve may be the biggest driver of jackal abundance patterns. Our integrated model expands the scope of ecological inference by taking advantage of widely available presence‐only data, while simultaneously leveraging richer, but typically limited, distance sampling data.

Bibliographic Information

JournalEcology
PublisherWiley
Publication Date2021-01-01
Publication Year2021
Volume102
Issue1
Document TypeJournal Article
Print ISSN0012-9658
eISSN1939-9170
DOI10.1002/ecy.3204
SubjectEcology & Organismal Biology

Access Information

NARA Access Coverage1997-01-01~Current
Journal Homepagehttps://esajournals.onlinelibrary.wiley.com/loi/19399170
Publisher PageOpen Publisher Page
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