Abstract
Understanding how species assemble across landscapes requires integration of data representing evolutionary, ecological, and biogeographic processes. We developed a comparative macrogenetic framework, applying it across 22 co‐distributed rainforest trees, to identify replicated landscape‐level genetic signatures. Diversity‐migration analyses and genogeographic clustering identified shared spatial dynamics in relation to refugial areas and genetic turnover, but with no direct relation to simple functional trait combinations. Three broad patterns emerged: Higher Northern Diversity with southward migration, Higher Southern Diversity with northward migration, and Homogeneous Diversity with no directional migration. We identified five (post hoc) species groups sharing gene flow and isolation‐by‐distance dynamics in relation to recognised biogeographic barriers. Replicated genetic signatures highlight how assembly processes emerge from interacting ecological and historical filters rather than single traits or biogeographic histories alone. We present a statistically replicable interpretational framework to identify shared evolutionary and ecological dynamics, offering scalable, management relevant tools to support restoration planning and biodiversity conservation under environmental change across all types of vegetation.