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Integrative analysis of genes reveals endoplasmic reticulum stress-related immune responses involved in dilated cardiomyopathy with fibrosis

Wanpeng Li; Peiling Liu; Huilin Liu; Fuchun Zhang; Yicheng Fu
Apoptosis · Vol. 28, Issue 9-10 · pp. 1406-1421 · 2023

Abstract

Endoplasmic reticulum (ER) stress has been implicated in the mechanisms underlying the fibrotic process in dilated cardiomyopathy (DCM) and results in disease exacerbation; however, the molecular details of this mechanism remain unclear. Through microarray and bioinformatic analyses, we explored genetic alterations in myocardial fibrosis (MF) and identified potential biomarkers related to ER stress. We integrated two public microarray datasets, including 19 DCM and 16 control samples, and comprehensively analyzed differential expression, biological functions, molecular interactions, and immune infiltration levels. The immune cell signatures suggest that inflammatory immune imbalance may promote MF progression. Both innate and adaptive immunity are involved in MF development, and T-cell subsets account for a considerable proportion of immune infiltration. The immune subtypes were further compared, and 103 differentially expressed ER stress-related genes were identified. These genes were mainly enriched in neuronal apoptosis, protein modification, oxidative stress reaction, glycolysis and gluconeogenesis, and NOD-like receptor signaling pathways. Furthermore, the 15 highest-scoring core genes were identified. Seven hub genes ( AK1 , ARPC3 , GSN , KPNA2 , PARP1 , PFKL , and PRKC ) might participate in immune-related mechanisms. Our results offer a new integrative view of the pathways and interaction networks of ER stress-related genes and provide guidance for developing novel therapeutic strategies for MF.

Bibliographic Information

JournalApoptosis
PublisherSpringer
Publication Date2023-10-01
Publication Year2023
Volume28
Issue9-10
Pages1406-1421
Document TypeJournal Article
Print ISSN1360-8185
eISSN1573-675X
DOI10.1007/s10495-023-01871-z

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NARA Access Coverage1996-01-01~Current
Journal Homepagehttps://www.springer.com/journal/10495
Publisher PageOpen Publisher Page
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