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Journal Article

Biogeographic partitioning of S outhern O cean microorganisms revealed by metagenomics

David Wilkins; Federico M. Lauro; Timothy J. Williams; Matthew Z. Demaere; Mark V. Brown; Jeffrey M. Hoffman; Cynthia Andrews‐Pfannkoch; Jeffrey B. Mcquaid; Martin J. Riddle; Stephen R. Rintoul; Ricardo Cavicchioli
Environmental Microbiology · Vol. 15, Issue 5 · pp. 1318-1333 · 2013

Abstract

Summary We performed a metagenomic survey (6.6 Gbp of 454 sequence data) of S outhern O cean ( SO ) microorganisms during the austral summer of 2007–2008, examining the genomic signatures of communities across a latitudinal transect from Hobart (44° S ) to the M ertz G lacier, A ntarctica (67° S ). Operational taxonomic units ( OTUs ) of the SAR 11 and SAR 116 clades and the cyanobacterial genera P rochlorococcus and S ynechococcus were strongly overrepresented north of the P olar F ront ( PF ). Conversely, OTUs of the G ammaproteobacterial S ulfur O xidizer‐ EOSA ‐1 ( GSO‐EOSA ‐1) complex, the phyla B acteroidetes and V errucomicrobia and order R hodobacterales were characteristic of waters south of the PF . Functions enriched south of the PF included a range of transporters, sulfur reduction and histidine degradation to glutamate, while branched‐chain amino acid transport, nucleic acid biosynthesis and methionine salvage were overrepresented north of the PF . The taxonomic and functional characteristics suggested a shift of primary production from cyanobacteria in the north to eukaryotic phytoplankton in the south, and reflected the different trophic statuses of the two regions. The study provides a new level of understanding about SO microbial communities, describing the contrasting taxonomic and functional characteristics of microbial assemblages either side of the PF .

Bibliographic Information

JournalEnvironmental Microbiology
PublisherWiley
Publication Date2013-05-01
Publication Year2013
Volume15
Issue5
Pages1318-1333
Document TypeJournal Article
Print ISSN1462-2912
eISSN1462-2920
DOI10.1111/1462-2920.12035
SubjectMicrobial Ecology

Access Information

NARA Access Coverage1999-01-01~Current
Journal Homepagehttps://onlinelibrary.wiley.com/loi/14622920
Publisher PageOpen Publisher Page
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