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Host signature effect on plant root‐associated microbiomes revealed through analyses of resident vs . active communities

Maya Ofek; Milana Voronov‐Goldman; Yitzhak Hadar; Dror Minz
Environmental Microbiology · Vol. 16, Issue 7 · pp. 2157-2167 · 2014

Abstract

Summary Plant roots create specific microbial habitat in the soil – the rhizosphere. In this study, we characterized the rhizosphere microbiome of four host plant species to get insight into the impact of the host (host signature effect) on resident vs . active communities. Results show a distinct plant host specific signature found among wheat, maize, tomato and cucumber, based on the following three parameters: (i) each plant promoted the activity of a unique suite of soil bacterial populations; (ii) significant variations were observed in the number and the degree of dominance of active populations; and (iii) the level of contribution of active ( rRNA ‐based) populations to the resident ( DNA ‐based) community profiles. In the rhizoplane of all four plants, a significant reduction of diversity was observed, relative to the bulk soil. Moreover, an increase in DNA–RNA correspondence indicated higher representation of active bacterial populations in the residing rhizoplane community. This study demonstrates that the host plant determines the bacterial community composition in its immediate vicinity, especially with respect to the active populations.

Bibliographic Information

JournalEnvironmental Microbiology
PublisherWiley
Publication Date2014-07-01
Publication Year2014
Volume16
Issue7
Pages2157-2167
Document TypeJournal Article
Print ISSN1462-2912
eISSN1462-2920
DOI10.1111/1462-2920.12228
SubjectMicrobial Ecology

Access Information

NARA Access Coverage1999-01-01~Current
Journal Homepagehttps://onlinelibrary.wiley.com/loi/14622920
Publisher PageOpen Publisher Page
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