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Comparative proteomics of a versatile, marine, iron‐oxidizing chemolithoautotroph

Roman A. Barco; N. Merino; B. Lam; B. Budnik; M. Kaplan; F. Wu; J. P. Amend; K. H. Nealson; D. Emerson
Environmental Microbiology · Vol. 26, Issue 6 · 2024

Abstract

This study conducted a comparative proteomic analysis to identify potential genetic markers for the biological function of chemolithoautotrophic iron oxidation in the marine bacterium Ghiorsea bivora . To date, this is the only characterized species in the class Zetaproteobacteria that is not an obligate iron‐oxidizer, providing a unique opportunity to investigate differential protein expression to identify key genes involved in iron‐oxidation at circumneutral pH. Over 1000 proteins were identified under both iron‐ and hydrogen‐oxidizing conditions, with differentially expressed proteins found in both treatments. Notably, a gene cluster upregulated during iron oxidation was identified. This cluster contains genes encoding for cytochromes that share sequence similarity with the known iron‐oxidase, Cyc2. Interestingly, these cytochromes, conserved in both Bacteria and Archaea, do not exhibit the typical β‐barrel structure of Cyc2. This cluster potentially encodes a biological nanowire‐like transmembrane complex containing multiple redox proteins spanning the inner membrane, periplasm, outer membrane, and extracellular space. The upregulation of key genes associated with this complex during iron‐oxidizing conditions was confirmed by quantitative reverse transcription‐PCR. These findings were further supported by electromicrobiological methods, which demonstrated negative current production by G. bivora in a three‐electrode system poised at a cathodic potential. This research provides significant insights into the biological function of chemolithoautotrophic iron oxidation.

Bibliographic Information

JournalEnvironmental Microbiology
PublisherWiley
Publication Date2024-06-01
Publication Year2024
Volume26
Issue6
Document TypeJournal Article
Print ISSN1462-2912
eISSN1462-2920
DOI10.1111/1462-2920.16632
SubjectMicrobial Ecology

Access Information

NARA Access Coverage1999-01-01~Current
Journal Homepagehttps://onlinelibrary.wiley.com/loi/14622920
Publisher PageOpen Publisher Page
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