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Specific detection of Pyricularia oryzae pathotype Triticum using qPCR and LAMP methods

Ken-ichi Ikeda; Kaichi Uchihashi; Itsuki Okuda; Zikai Xiang; Hitoshi Nakayashiki
Journal of General Plant Pathology · Vol. 90, Issue 2 · pp. 82-94 · 2024

Abstract

Wheat blast is an important disease that affects cross-border food security. The causal pathogen, Pyricularia oryzae (syn. Magnaporthe oryzae ) Triticum pathotype (MoT), forms a phylogenetic group distinct from the other P. oryzae pathotypes pathogenic on various gramineous plants. Here we developed MoT-specific primer sets for qPCR and LAMP detection methods, and their amplification specificity and efficiency were tested in comparison with previous reported MoT-specific primers. The amplification efficiency and specificity were affected by the polymerase premix. To evaluate the detection specificity, purified DNA samples of 15 MoT isolates, 89 non-MoT isolates of Pyricularia spp., and crude DNA from wheat plants inoculated with MoT were used. We conclude that the Sp3 primer sets for qPCR and the MoT3 L primer sets for LAMP were the best in this research.

Bibliographic Information

JournalJournal of General Plant Pathology
PublisherSpringer
Publication Date2024-03-01
Publication Year2024
Volume90
Issue2
Pages82-94
Document TypeJournal Article
Print ISSN1345-2630
eISSN1610-739X
DOI10.1007/s10327-023-01162-0

Access Information

NARA Access Coverage2000-01-01~Current
Journal Homepagehttps://www.springer.com/journal/10327
Publisher PageOpen Publisher Page
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