Abstract
Thermal stress triggers the breakdown of the obligate symbiosis between the cnidarian coral host and its autotrophic dinoflagellates of the family Symbiodiniaceae. This diverse family exhibits pronounced functional variation that has large implications for the survival of their coral host. In this study, we explored patterns of symbiont community composition and diversity in the coral Turbinaria reniformis , a turbid reef specialist, along a latitudinal and environmental gradient in Western Australia. Using metabarcoding of the internal transcribed spacer region 2, we explored symbiont community patterns, their environmental drivers, and potential associations with host genetic structure. Our findings reveal a predominance of Cladocopium across our study area, with distinct regional composition influenced primarily by sea surface temperature. Geographical distance and host genetic data did not align with symbiont community divergence, suggesting a complex interplay of environmental and genetic factors t shaping the community structure. This study underscores Cladocopium stability in Western Australia across large distances and strong environmental gradients. It also highlights the highly diversified lineage community that may explain T. reniformis ability to thrive in a wide range of environmental conditions.