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Journal Article

rfishbase: exploring, manipulating and visualizing FishBase data from R

C. Boettiger; D. T. Lang; P. C. Wainwright
Journal of Fish Biology · Vol. 81, Issue 6 · pp. 2030-2039 · 2012

Abstract

This article introduces a package that provides interactive and programmatic access to the FishBase repository. This package allows interaction with data on over 30 000 fish species in the rich statistical computing environment, R. This direct, scriptable interface to FishBase data enables better discovery and integration essential for large‐scale comparative analyses. This article provides several examples to illustrate how the package works, and how it can be integrated into phylogenetics packages such as ape and geiger.

Bibliographic Information

JournalJournal of Fish Biology
PublisherWiley
Publication Date2012-11-01
Publication Year2012
Volume81
Issue6
Pages2030-2039
Document TypeJournal Article
Print ISSN0022-1112
eISSN1095-8649
DOI10.1111/j.1095-8649.2012.03464.x
SubjectGeneral Aquaculture, Fisheries & Fish Science

Access Information

NARA Access Coverage1997-01-01~Current
Journal Homepagehttps://onlinelibrary.wiley.com/loi/10958649
Publisher PageOpen Publisher Page
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