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Valid oxygen uptake measurements: using high r 2 values with good intentions can bias upward the determination of standard metabolic rate

Denis Chabot; Yangfan Zhang; Anthony P. Farrell
Journal of Fish Biology · Vol. 98, Issue 5 · pp. 1206-1216 · 2021

Abstract

This analysis shows good intentions in the selection of valid and precise oxygen uptake ( O 2 ) measurements by retaining only slopes of declining dissolved oxygen level in a respirometer that have very high values of the coefficient of determination, r 2 , are not always successful at excluding nonlinear slopes. Much worse, by potentially removing linear slopes that have low r 2 only because of a low signal‐to‐noise ratio, this procedure can overestimate the calculation of standard metabolic rate (SMR) of the fish. To remedy this possibility, a few simple diagnostic tools are demonstrated to assess the appropriateness of a given minimum acceptable r 2 , such as calculating the proportion of rejected O 2 determinations, producing a histogram of the r 2 values and a plot of r 2 as a function of O 2 . The authors offer solutions for cases when many linear slopes have low r 2 . The least satisfactory but easiest to implement is lowering the minimum acceptable r 2 . More satisfactory solutions involve processing (smoothing) the raw signal of dissolved oxygen as a function of time to improve the signal‐to‐noise ratio and the r 2 s.

Bibliographic Information

JournalJournal of Fish Biology
PublisherWiley
Publication Date2021-05-01
Publication Year2021
Volume98
Issue5
Pages1206-1216
Document TypeJournal Article
Print ISSN0022-1112
eISSN1095-8649
DOI10.1111/jfb.14650
SubjectGeneral Aquaculture, Fisheries & Fish Science

Access Information

NARA Access Coverage1997-01-01~Current
Journal Homepagehttps://onlinelibrary.wiley.com/loi/10958649
Publisher PageOpen Publisher Page
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