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Journal Article

Analysis of patchclamp recordings: model-free multiscale methods and software

Florian Pein; Benjamin Eltzner; Axel Munk
European Biophysics Journal · Vol. 50, Issue 2 · pp. 187-209 · 2021

Abstract

Analysis of patchclamp recordings is often a challenging issue. We give practical guidance how such recordings can be analyzed using the model-free multiscale idealization methodology JSMURF, JULES, and HILDE. We provide an operational manual how to use the accompanying software available as an R-package and as a graphical user interface. This includes selection of the right approach and tuning of parameters. We also discuss advantages and disadvantages of model-free approaches in comparison to hidden Markov model approaches and explain how they complement each other.

Bibliographic Information

JournalEuropean Biophysics Journal
PublisherSpringer
Publication Date2021-03-01
Publication Year2021
Volume50
Issue2
Pages187-209
Document TypeJournal Article
Print ISSN0175-7571
eISSN1432-1017
DOI10.1007/s00249-021-01506-8

Access Information

NARA Access Coverage1974-01-01~Current
Journal Homepagehttps://www.springer.com/journal/249
Publisher PageOpen Publisher Page
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