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Rapid Detection of Aeromonas veronii Using GGDEF Gene‐Based Colorimetric Loop‐Mediated Isothermal Amplification

Tien Tien Vicky Lau; Suat Moi Puah; Kek Heng Chua
Journal of Fish Diseases · Vol. 48, Issue 7 · 2025

Abstract

Aeromonas veronii has emerged as an important fish pathogen that poses threats to the aquaculture industry worldwide, and rapid detection is essential to minimise negative economic impact. In this study, a colorimetric loop‐mediated isothermal amplification (LAMP) assay was developed to rapidly detect A. veronii , targeting a gene encoding GGDEF domain‐containing diguanylate cyclase. The entire LAMP reaction could be completed in 30 min at 65°C based on colour change from pink to yellow. In addition, the assay demonstrated 100% specificity with no cross reaction with other common fish pathogens. The detection limit (LOD) was 500 pg/μL using purified plasmid and 1.72 × 10 5 cfu/mL (equivalent to 1.72 × 10 2 cfu/reaction) using crude genomic DNA extracted from the pure culture of A. veronii ATCC 9071. LAMP demonstrated comparable performance to conventional PCR using 57 bacterial isolates, with 100% (20/20) specificity, 91.9% (34/37) sensitivity, 94.7% (54/57) accuracy and a 0.888 Cohen's kappa value. Lastly, the LOD of LAMP in a spiked water sample was 1.72 × 10 5 cfu/mL (equivalent to 3.44 × 10 3 cfu/reaction). Overall, our LAMP assay has a high level of diagnostic agreement with conventional PCR and can be used as a valuable tool for the rapid detection of A. veronii from environmental samples.

Bibliographic Information

JournalJournal of Fish Diseases
PublisherWiley
Publication Date2025-07-01
Publication Year2025
Volume48
Issue7
Document TypeJournal Article
Print ISSN0140-7775
eISSN1365-2761
DOI10.1111/jfd.14112
SubjectGeneral Aquaculture, Fisheries & Fish Science

Access Information

NARA Access Coverage1997-01-01~Current
Journal Homepagehttps://onlinelibrary.wiley.com/loi/13652761
Publisher PageOpen Publisher Page
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