Abstract
Mixotrophic bacterivory by small phytoflagellates (SP) can equal that of heterotrophic flagellates (HF) in marine euphotic waters. Due to their differing nutritional requirements from prey, SP and HF bacterivory are thought to differentially impact nutrient and carbon cycling through microbial food webs. However, little is known on how the relative dominance of SP and HF feeding shifts along environmental gradients, especially over short spatio‐temporal scales. Here, SP and HF bacterivory rates were compared over 5 d at three depths in the upper water column of a dynamic coastal zone, through the use of surrogate prey. SP and HF bacterivory strongly fluctuated over both spatial ( μ mol photons m −2 s −1 ). SP bacterivory, but not that of HF, was positively correlated to total bacterial abundance, with HF potentially selectively targeting actively growing bacteria. Overall, the present study indicates that meteorological conditions affecting irradiance levels could strongly impact microbial food web dynamics and the cycling of carbon and nutrients through coastal marine systems.