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Journal Article

Extreme Sensitivity of Fitness to Environmental Conditions: Lessons from #1BigBatch

Grant Kinsler; Kara Schmidlin; Daphne Newell; Rachel Eder; Sam Apodaca; Grace Lam; Dmitri Petrov; Kerry Geiler-Samerotte
Journal of Molecular Evolution · Vol. 91, Issue 3 · pp. 293-310 · 2023

Abstract

The phrase “survival of the fittest” has become an iconic descriptor of how natural selection works. And yet, precisely measuring fitness, even for single-celled microbial populations growing in controlled laboratory conditions, remains a challenge. While numerous methods exist to perform these measurements, including recently developed methods utilizing DNA barcodes, all methods are limited in their precision to differentiate strains with small fitness differences. In this study, we rule out some major sources of imprecision, but still find that fitness measurements vary substantially from replicate to replicate. Our data suggest that very subtle and difficult to avoid environmental differences between replicates create systematic variation across fitness measurements. We conclude by discussing how fitness measurements should be interpreted given their extreme environment dependence. This work was inspired by the scientific community who followed us and gave us tips as we live tweeted a high-replicate fitness measurement experiment at #1BigBatch.

Bibliographic Information

JournalJournal of Molecular Evolution
PublisherSpringer
Publication Date2023-06-01
Publication Year2023
Volume91
Issue3
Pages293-310
Document TypeJournal Article
Print ISSN0022-2844
eISSN1432-1432
DOI10.1007/s00239-023-10114-3

Access Information

NARA Access Coverage1971-01-01~Current
Journal Homepagehttps://www.springer.com/journal/239
Publisher PageOpen Publisher Page
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