CRISP-PTG-Assembler Ver. 1.0: a primer design tool for polycistronic tRNA-gRNA (PTG) assembly for Cas9-based multiplex genome editing in plants - Soham Ray; Joshitha Vijayan; S. Vanchinathan; Rajkumar Dhakar; Nazima Nasrullah; Shivani Nagar; Tushar Kanti Dutta; Viswanthan Chinnusamy (Planta, 2026)

A robust 1K-core marker set for wild germplasm management and targeted pre-breeding of rice: development and applications - Debashree Dalai; Dipti Ranjan Pani; Swayamsiddha Aswita Dhal; Motilal Behera; Tapan Kumar Mondal; Muhammad Azaharudheen TP; Joshitha Vijayan; Deepa Sarkar; Pallavi Ghose; Abhijeet Roy; Kutubuddin A Molla; Anilkumar C; et al. (Theoretical and Applied Genetics, 2026)

Identification of potential genes for susceptibility in rice-Magnaporthe oryzae interaction - Joshitha Vijayan; Soham Ray; Sourabh Kumar Jain; Priyanka Jain; Nagendra Kumar Singh; Tilak Raj Sharma (Journal of Plant Biochemistry and Biotechnology, 2025)

Genetic Dissection of Component Traits for Salinity Tolerance at Reproductive Stage in Rice - Krishnendu Chattopadhyay; Sangram Keshori Mohanty; Joshitha Vijayan; Bishnu Charan Marndi; Ananta Sarkar; Kutubuddin Ali Molla; Koushik Chakraborty; Soham Ray; Ramani Kumar Sarkar (Plant Molecular Biology Reporter, 2021)

The core set of sequence-tagged microsatellite sites markers between halophytic wild rice Oryza coarctata and Oryza sativa complex - Debashree Dalai; Mridul Chakraborti; Tapan Kumar Mondal; Soham Ray; Meera Kumari Kar; Koushik Chakraborty; Dipti Ranjan Pani; Sutapa Sarkar; Lotan Kumar Bose; Motilal Behera; Krishnendu Chattopadhyay; Deepa; et al. (Euphytica, 2021)

Novel biotic stress responsive candidate gene based SSR (cgSSR) markers from rice - Kutubuddin Ali Molla; T. P. Muhammed Azharudheen; Soham Ray; Sutapa Sarkar; Alaka Swain; Mridul Chakraborti; Joshitha Vijayan; Onkar Nath Singh; Mirza Jaynul Baig; Arup Kumar Mukherjee (Euphytica, 2019)

Development and validation of cross-transferable and polymorphic DNA markers for detecting alien genome introgression in Oryza sativa from Oryza brachyantha - Soham Ray; Lotan K. Bose; Joshitha Ray; Umakanta Ngangkham; Jawahar L. Katara; Sanghamitra Samantaray; Lambodar Behera; Mahender Anumalla; Onkar N. Singh; Meingsheng Chen; Rod A. Wing; Trilochan Mohapatra (Molecular Genetics and Genomics, 2016)