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Deviations from additivity in APOE4-mediated late-onset Alzheimer’s disease risk across races and ethnicitiesNARA Subscribed
APOE ’s ε4 haplotype ( APOE4 ) is late onset Alzheimer’s disease’s (LOAD) strongest genetic risk factor. Therefore, accurately modeling APOE4 ’s effect is critical to understanding LOAD. This is especially important as APOE4 odds ratios (OR) vary across racial and ethnic (R/E) groups. We analyzed the APOE4 -LOAD association in 3,196 East Asian, 31,105 non-Hispanic White (White), 1,646 Hispanic and Latino (Hispanic), and 6,068...
Interpretable deep learning reveals spatiotemporal MRI features of brain aging that align with neurodegenerationNARA Subscribed
Cortical thinning and atrophy are hallmarks of brain aging that have been characterized using magnetic resonance imaging (MRI). Brain aging involves many neuroanatomic features whose effects on brain structure remain unexplored. To address this challenge, we trained interpretable deep neural networks (DNNs) to estimate brain age (BA) from T 1 -weighted ( T 1 w) MRI. By identifying MRI features unapparent to humans, DNNs can fi...
Phased potato genome assembly and association genetics enable delineation of the H1 resistance locus against potato cyst nematodesNARA Subscribed
The complexity of potato genetics, characterised by tetrasomic inheritance, has contributed to slower genetic gain in potato compared to other major crops. Disease resistance genes, often found in large clusters of highly similar paralogs and alleles, further complicate genetic studies. The H1 resistance locus, introgressed into potato cultivars from Solanum tuberosum ssp. andigena , has been successfully used for over 60 year...
SNAPSHOT USA 2024: Year 6 of the Coordinated National Camera Trap Survey of the United StatesNARA Subscribed
Motivation SNAPSHOT USA is an annual, multi‐contributor camera trap survey of mammals across the United States. The growing SNAPSHOT USA dataset is intended for tracking the spatial and temporal responses of mammal populations to changes in land use, land cover and climate. These data will be useful for exploring the drivers of spatial and temporal changes in relative abundance and distribution, as well as the impacts of speci...
Climate change and water quality influence on juvenile Atlantic sturgeon aggregation in the Altamaha River, GeorgiaNARA Subscribed
In the summer, juvenile Atlantic sturgeon ( Acipenser oxyrinchus oxyrinchus ) are vulnerable to extreme water quality conditions (i.e., temperature, dissolved oxygen [DO], and salinity) in the estuaries they inhabit. The effects of climate change on Atlantic sturgeon are largely unknown, but it may exacerbate these water quality issues. We used a 20-year dataset from the Altamaha River estuary, Georgia, USA to fit negative bin...
Local and Landscape‐Level Environmental Conditions Drive Habitat Selection Across Terrestrial Mammal SpeciesNARA Subscribed
Aim Animal movements are a fundamental process affecting communities and ecosystems. Quantifying habitat selection across species and habitats is key for understanding how animals respond to environmental change. Currently, we lack comparative studies that examine how habitat selection varies across species traits and landscapes. We aim to quantify global patterns of habitat selection to help understand the fundamental drivers...
Alzheimer’s disease (AD) disproportionately affects women and carriers of the apolipoprotein E ε4 allele (APOE4), yet little is known about how sex and APOE interact to influence white matter (WM) integrity during disease progression. We integrated diffusion MRI and matched blood transcriptomic data to investigate these interactions and their underlying biological mechanisms. WM microstructure was quantified using diffusion te...
Inshore marine coastal zone migration patterns in Atlantic salmon post‐smolts emigrating from eight rivers in north‐east ScotlandNARA Subscribed
Atlantic salmon, Salmo salar , migrate through multiple habitat types, each having the potential to impact differently upon migration success. The inshore marine coastal zone is arguably disproportionately impacted by potential stressors on populations. We investigated the migration of Atlantic salmon post‐smolts ( n = 898) from eight rivers (populations) through the inshore marine coastal zone over a 2‐year period using acous...
Beyond Climate Change: The Role of Integrated Soil Fertility Management for Sustaining Future Maize Yield in Sub‐Saharan AfricaNARA Subscribed
Climate change is projected to exacerbate food insecurity in sub‐Saharan Africa (SSA) by reducing crop yields and soil fertility. Many climate change impact studies in SSA have overlooked long‐term effects of soil fertility on crop yield. We evaluated maize yields under different scenarios of soil fertility (using soil organic carbon as a proxy) and climate change (considering changes in temperature, rainfall, and CO 2 ) at fo...
Angler demographics and motivations are an important consideration to successful fisheries management. We examined 29 years of angler license and activity records from the recreational Atlantic salmon fishery in Newfoundland and Labrador, Canada to: (1) provide a contemporary evaluation of angler demographic trends; (2) evaluate age and regional differences between anglers who prioritized retention versus catch‐and‐release; an...
Marine megafauna species are affected by a wide range of anthropogenic threats. To evaluate the risk of such threats, species’ vulnerability to each threat must first be determined. We build on the existing threats classification scheme and ranking system of the International Union for Conservation of Nature (IUCN) Red List of Threatened Species by assessing the vulnerability of 256 marine megafauna species to 23 at‐sea threat...