C. Higuchi results 29
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Motivation Here, we make available a second version of the BioTIME database, which compiles records of abundance estimates for species in sample events of ecological assemblages through time. The updated version expands version 1.0 of the database by doubling the number of studies and includes substantial additional curation to the taxonomic accuracy of the records, as well as the metadata. Moreover, we now provide an R packag...
Investigating impacts of the mycothiazole chemotype as a chemical probe for the study of mitochondrial function and agingNARA Subscribed
Small molecule inhibitors of the mitochondrial electron transport chain (ETC) hold significant promise to provide valuable insights to the field of mitochondrial research and aging biology. In this study, we investigated two molecules: mycothiazole (MTZ) - from the marine sponge C. mycofijiensis and its more stable semisynthetic analog 8- O -acetylmycothiazole (8-OAc) as potent and selective chemical probes based on their high...
Giants of the Amazon: How does environmental variation drive the diversity patterns of large trees?NARA Subscribed
For more than three decades, major efforts in sampling and analyzing tree diversity in South America have focused almost exclusively on trees with stems of at least 10 and 2.5 cm diameter, showing highest species diversity in the wetter western and northern Amazon forests. By contrast, little attention has been paid to patterns and drivers of diversity in the largest canopy and emergent trees, which is surprising given these h...
Aim Water availability is the major driver of tropical forest structure and dynamics. Most research has focused on the impacts of climatic water availability, whereas remarkably little is known about the influence of water table depth and excess soil water on forest processes. Nevertheless, given that plants take up water from the soil, the impacts of climatic water supply on plants are likely to be modulated by soil water con...
Aim Predictions of plant traits over space and time are increasingly used to improve our understanding of plant community responses to global environmental change. A necessary step forward is to assess the reliability of global trait predictions. In this study, we predict community mean plant traits at the global scale and present a systematic evaluation of their reliability in terms of the accuracy of the models, ecological r...
Global gradients in intraspecific variation in vegetative and floral traits are partially associated with climate and species richnessNARA Subscribed
Aim Intraspecific trait variation (ITV) within natural plant communities can be large, influencing local ecological processes and dynamics. Here, we shed light on how ITV in vegetative and floral traits responds to large‐scale abiotic and biotic gradients (i.e., climate and species richness). Specifically, we tested whether associations of ITV with temperature, precipitation and species richness were consistent with any of fou...
TRY plant trait database – enhanced coverage and open accessNARA Subscribed
Plant traits—the morphological, anatomical, physiological, biochemical and phenological characteristics of plants—determine how plants respond to environmental factors, affect other trophic levels, and influence ecosystem properties and their benefits and detriments to people. Plant trait data thus represent the basis for a vast area of research spanning from evolutionary biology, community and functional ecology, to biodivers...
Compositional response of Amazon forests to climate changeNARA Subscribed
Most of the planet's diversity is concentrated in the tropics, which includes many regions undergoing rapid climate change. Yet, while climate‐induced biodiversity changes are widely documented elsewhere, few studies have addressed this issue for lowland tropical ecosystems. Here we investigate whether the floristic and functional composition of intact lowland Amazonian forests have been changing by evaluating records from 106...
Motivation The BioTIME database contains raw data on species identities and abundances in ecological assemblages through time. These data enable users to calculate temporal trends in biodiversity within and amongst assemblages using a broad range of metrics. BioTIME is being developed as a community‐led open‐source database of biodiversity time series. Our goal is to accelerate and facilitate quantitative analysis of temporal...
Understanding the processes that determine above‐ground biomass ( AGB ) in Amazonian forests is important for predicting the sensitivity of these ecosystems to environmental change and for designing and evaluating dynamic global vegetation models ( DGVM s). AGB is determined by inputs from woody productivity [woody net primary productivity ( NPP )] and the rate at which carbon is lost through tree mortality. Here, we test whet...
Markedly divergent estimates of A mazon forest carbon density from ground plots and satellitesNARA Subscribed
Aim The accurate mapping of forest carbon stocks is essential for understanding the global carbon cycle, for assessing emissions from deforestation, and for rational land‐use planning. Remote sensing ( RS ) is currently the key tool for this purpose, but RS does not estimate vegetation biomass directly, and thus may miss significant spatial variations in forest structure. We test the stated accuracy of pantropical carbon maps...
Amazon forest carbon dynamics predicted by profiles of canopy leaf area and light environmentNARA Subscribed
Tropical forest structural variation across heterogeneous landscapes may control above‐ground carbon dynamics. We tested the hypothesis that canopy structure (leaf area and light availability) – remotely estimated from LiDAR – control variation in above‐ground coarse wood production (biomass growth). Using a statistical model, these factors predicted biomass growth across tree size classes in forest near Manaus, Brazil. The sa...
Are compound leaves an adaptation to seasonal drought or to rapid growth? Evidence from the Amazon rain forestNARA Subscribed
Aim To assess the hypotheses that compound leaves of trees in the Amazon forest are an adaptation to drought and/or rapid growth. Location Amazon rain forest, South America. Methods Genera from 137 permanent forest plots spread across Amazonia were classified into those with compound leaves and those with simple leaves. Metrics of compound leaf prevalence were then calculated for each plot and regression models that accounted...
Ecology Letters (2009) 12: E22–E25 Abstract Lloyd et al. (2009) question the methods, concepts and conclusions of Fisher et al. (2008) . We address these assertions, and place our work into a broader context. We demonstrate the veracity of Fisher et al. , and further show that lack of data for intermediate‐scale tree mortality disturbance events for old‐growth tropical forests might prevent robust extrapolation of forest plot...
Does the disturbance hypothesis explain the biomass increase in basin‐wide Amazon forest plot data?NARA Subscribed
Positive aboveground biomass trends have been reported from old‐growth forests across the Amazon basin and hypothesized to reflect a large‐scale response to exterior forcing. The result could, however, be an artefact due to a sampling bias induced by the nature of forest growth dynamics. Here, we characterize statistically the disturbance process in Amazon old‐growth forests as recorded in 135 forest plots of the RAINFOR netwo...
The biomass of tropical forests plays an important role in the global carbon cycle, both as a dynamic reservoir of carbon, and as a source of carbon dioxide to the atmosphere in areas undergoing deforestation. However, the absolute magnitude and environmental determinants of tropical forest biomass are still poorly understood. Here, we present a new synthesis and interpolation of the basal area and aboveground live biomass of...