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Biocultural evolution has created propensities that guide, largely unconsciously, how species think and behave. Human anthropocentrism leads to a lack of recognition of the propensities shared by Homo sapiens and other species. Human narratives and values reflect these propensities even as they also affect evolution and possible pathways of (un)sustainability for social-ecological systems (SES). Signals and narratives provide...
Common, low-frequency, rare, and ultra-rare coding variants contribute to COVID-19 severityNARA Subscribed
The combined impact of common and rare exonic variants in COVID-19 host genetics is currently insufficiently understood. Here, common and rare variants from whole-exome sequencing data of about 4000 SARS-CoV-2-positive individuals were used to define an interpretable machine-learning model for predicting COVID-19 severity. First, variants were converted into separate sets of Boolean features, depending on the absence or the pr...
While investigating biomarkers for infection with salmonid alphavirus ( SAV ), the cause of pancreas disease ( PD ), a selective precipitation reaction ( SPR ) has been discovered in serum which could be an on‐farm qualitative test and an in‐laboratory quantitative assay for health assessments in aquaculture. Mixing serum from Atlantic salmon, Salmo salar , with SAV infection with a sodium acetate buffer caused a visible preci...
Diseases which cause skeletal muscle myopathy are some of the most economically damaging diseases in Atlantic salmon, S almo salar L., aquaculture. Despite this, there are limited means of assessing fish health non‐destructively. Previous investigation of the serum proteome of Atlantic salmon, S almo salar L., during pancreas disease ( PD ) has identified proteins in serum that have potential as biomarkers of the disease. Amon...
Geographical distribution of salmonid alphavirus subtypes in marine farmed Atlantic salmon, Salmo salar L., in Scotland and IrelandNARA Subscribed
Sequence data from salmonid alphavirus (SAV) strains obtained from farmed marine Atlantic salmon, Salmo salar L. , over a 20‐year period between 1991 and 2011 was reviewed to examine the geographical distribution of the genetically defined SAV subtypes in twelve regions across Ireland and Scotland. Of 160 different Atlantic salmon SAV strains examined, 62 belonged to subtype 1, 28 to subtype 2, 34 to subtype 4, 35 to subtype 5...
An annual disease problem with high levels of mortality in Atlantic salmon, Salmo salar L., on a freshwater farm was investigated. In 2000, mortalities began early in October and peaked in December, being unevenly distributed between tanks. Histopathological changes included severe hyperplasia of gill epithelium, with fusion of secondary lamellae, and extensive necrosis of the haematopoietic centres in the kidney and spleen, t...
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