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Vegetation surveys provide key information for evaluating functions within and across estuaries. However, survey methods and analyses are often highly variable, site-specific, and driven by monitoring program goals and objectives, making regional comparisons that include multiple programs difficult. This study compared multiple transect- and quadrat-based vegetation monitoring methods within eight southern California estuaries...
Associations between patterns of brain connectivity and brain structural features have transdiagnostic relevance to psychopathology. There is considerable evidence for disruptions to the hippocampus and temporoparietal brain systems in psychotic disorders. The present study examines structure–function relationships—specifically, the relation of hippocampal volume with patterns of temporoparietal effective connectivity—in youth...
Lynch syndrome caused by a pathogenic SINE-VNTR-Alu (SVA) insertion in MSH2 gene identified by long-read DNA sequencingNARA Subscribed
Lynch syndrome, the most common hereditary cancer syndrome, is caused by germline pathogenic variants in DNA mismatch repair (MMR) genes. Identifying complex or structural MMR gene pathogenic variants can be challenging with short-read sequencing resulting in patients with unexplained MMR-deficient tumours. In this study, we report multiple members of a family who developed MSH2-deficient tumours where clinical multi-gene pane...
Diagnosing Linearity Along the Carbon Cascade in Terrestrial Biosphere Models and ObservationsNARA Subscribed
Elevated carbon dioxide (eCO 2 ) acts as a fertiliser for photosynthesis, driving an increase in gross primary production (GPP). However, it is unclear how effectively increased GPP propagates along the ‘carbon (C) cascade’ to increase net primary production (NPP) and vegetation C stocks ( C veg ) in different plant compartments. Vegetation models were criticised for being overly sensitive to photosynthesis (source‐driven), ne...
Pacific sardine (Sardinops sagax) are an economically important forage fish in the Northeast Pacific Ocean that undergo large changes in abundance over decadal scales and exhibit high individual variation in somatic growth. Past studies have suggested that somatic growth in Pacific sardine may be density-dependent and vary regionally in response to environmental conditions. We analyzed somatic growth in Pacific sardine off the...
Interpretable deep learning reveals spatiotemporal MRI features of brain aging that align with neurodegenerationNARA Subscribed
Cortical thinning and atrophy are hallmarks of brain aging that have been characterized using magnetic resonance imaging (MRI). Brain aging involves many neuroanatomic features whose effects on brain structure remain unexplored. To address this challenge, we trained interpretable deep neural networks (DNNs) to estimate brain age (BA) from T 1 -weighted ( T 1 w) MRI. By identifying MRI features unapparent to humans, DNNs can fi...
The potential efficacy of continuous plantar foot cooling during relatively mild simulated occupational heat stress—a pilot studyNARA Subscribed
Purpose To identify the effect size regarding glabrous skin foot cooling on core temperature, cognitive performance, and physical work capacity (PWC) during mild simulated occupational heat stress. Methods A pilot sample of twelve healthy adults (5 women) completed experimental visits in a 38.7 ± 0.7 ℃ and 46 ± 9% relative humidity environment that consisted of 60-minutes of steady-state upper body ergometry exercise followed...
Ecology of community reassembly: Movements and diets of megafauna during a decade of restoration in MozambiqueNARA Subscribed
The last decade has brought a worldwide surge of interest in rewilding—the repopulation of large herbivores and carnivores—as a strategy for conserving species and reviving ecosystem functions. Rewilding initiatives, if closely monitored, can provide unique insights into the ecology of the world's largest animals at otherwise impossible spatial and temporal scales. Capitalizing on these opportunities, and developing a knowledg...
Conservation (or safe) havens are protected areas where barriers (e.g., fences) separate biodiversity from threatening processes and are being increasingly used to support conservation. Differences between selection pressures inside and outside havens can be anticipated; however, understanding of the evolutionary consequences of these differences is limited, and many changes may be going unnoticed. This hampers assessments of...
Genetic variation in three endangered allopolyploid Lepidium species was assayed using amplicon sequencing of 16 nuclear genesand phylogenetic analysis to distinguish ortholog/paralog (homoeolog) relationships. After phylogenetic analysis, the 16 sets of gene sequences were scored as co‐dominant alleles at a total of 55 putative loci in the target species L. kirkii , L. sisymbrioides , and L. solandri . Lepidium kirkii has per...
Alzheimer’s disease (AD) disproportionately affects women and carriers of the apolipoprotein E ε4 allele (APOE4), yet little is known about how sex and APOE interact to influence white matter (WM) integrity during disease progression. We integrated diffusion MRI and matched blood transcriptomic data to investigate these interactions and their underlying biological mechanisms. WM microstructure was quantified using diffusion te...
Effects of cigarette smoke and HIV-1 factors on blood-brain barrier integrity and permeability in an in vitro modelNARA Subscribed
Background: HIV-associated neurocognitive impairment (HAND) is a common complication of HIV-1 infection, which can be exacerbated by exposure to cigarette smoke (CS). Tight junction proteins (TJPs) of the blood-brain barrier (BBB) play a crucial role in maintaining BBB integrity and preventing the entry of circulating toxic factors, including those resulting from HIV-1 infection, into the central nervous system. Both CS exposu...
The germline MLH1 c.-42 C > T (rs41285097) promoter variant has been identified in cases with MLH1-deficient colorectal or endometrial cancers but remains a variant of uncertain significance. Genetic testing identified two new MLH1 c.-42 C > T index cases from Australia and the USA. Clinicopathologic and molecular characterisation of tumour and non-neoplastic tissues was performed to investigate the potential mechanism of path...
With growing demand for land sector carbon abatement to support multiple objectives, there are calls to improve how social measures can be applied to inform investment decisions. Yet, limitations exist in using social measures to inform land-use investment and valuation frameworks. This study focuses on how social measures can inform the alignment of land sector investment priorities with regional social contexts. In partnersh...