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In genetically heterogeneous (UM-HET3) mice produced by the CByB6F1 × C3D2F1 cross, the Nrf2 activator astaxanthin (Asta) extended the median male lifespan by 12% ( p = 0.003, log-rank test), while meclizine (Mec), an mTORC1 inhibitor, extended the male lifespan by 8% ( p = 0.03). Asta was fed at 1840 ± 520 (9) ppm and Mec at 544 ± 48 (9) ppm, stated as mean ± SE ( n ) of independent diet preparations. Both were started at 12...
Disentangling the historical routes to community assembly in the global epicentre of biodiversityNARA Subscribed
Aim The exceptional turnover in biota with elevation and number of species coexisting at any elevation makes tropical mountains hotspots of biodiversity. However, understanding the historical processes through which species arising in geographical isolation (i.e. allopatry) assemble along the same mountain slope (i.e. sympatry) remains a major challenge. Multiple models have been proposed including (1) the sorting of already e...
Human cytomegalovirus: taking the strainNARA Subscribed
Summary Peatlands represent an enormous carbon reservoir and have a potential impact on the global climate because of the active methanogenesis and methanotrophy in these soils. Uncultivated methanotrophs from seven European peatlands were studied using a combination of molecular methods. Screening for methanotroph diversity using a particulate methane monooxygenase‐based diagnostic gene array revealed that Methylocystis ‐rela...
Marine methylotrophs revealed by stable‐isotope probing, multiple displacement amplification and metagenomicsNARA Subscribed
Summary The concentrations of one‐carbon substrates that fuel methylotrophic microbial communities in the ocean are limited and the specialized guilds of bacteria that use these molecules may exist at low relative abundance. As a result, these organisms are difficult to identify and are often missed with existing cultivation and gene retrieval methods. Here, we demonstrate a novel proof of concept: using environmentally‐releva...
Diversity of the active methanotrophic community in acidic peatlands as assessed by mRNA and SIP‐PLFA analysesNARA Subscribed
Summary The active methanotroph community was investigated for the first time in heather ( Calluna )‐covered moorlands and Sphagnum / Eriophorum ‐covered UK peatlands. Direct extraction of mRNA from these soils facilitated detection of expression of methane monooxygenase genes, which revealed that particulate methane monooxygenase and not soluble methane monooxygenase was probably responsible for CH 4 oxidation in situ , becau...
Identification of active methanotrophs in a landfill cover soil through detection of expression of 16S rRNA and functional genesNARA Subscribed
Summary Active methanotrophs in a landfill soil were revealed by detecting the 16S rRNA of methanotrophs and the mRNA transcripts of key genes involved in methane oxidation. New 16S rRNA primers targeting type I and type II methanotrophs were designed and optimized for analysis by denaturing gradient gel electrophoresis. Direct extraction of RNA from soil enabled the analysis of the expression of the functional genes: mmoX , p...
Using fossil spring deposits in the Death Valley region, USA to evaluate palaeoflowpathsNARA Subscribed
Spring deposits reveal the timing and environment of past groundwater discharge. Herein, however, the potential for fossil spring deposits to infer water sources and palaeoflowpaths through trace elements and stable and radiogenic isotopes is examined. Past discharge (70 to 285 ka) in the Tecopa Basin in the Death Valley region of southeastern California is represented by tufa deposits, including mounds, pools, cemented ledges...
Identification of a complete methane monooxygenase operon from soil by combining stable isotope probing and metagenomic analysisNARA Subscribed
Summary Stable isotope probing (SIP) allows the isolation of nucleic acids from targeted metabolically active organisms in environmental samples. In previous studies, DNA‐SIP has been performed with the one‐carbon growth substrates methane and methanol to study methylotrophic organisms. The methylotrophs that incorporated the labelled substrate were identified with polymerase chain reaction and sequencing of 16S rRNA and ‘func...
Bacterial diversity in the bacterioneuston (sea surface microlayer): the bacterioneuston through the looking glassNARA Subscribed
Summary The bacterioneuston is defined as the community of bacteria present within the neuston or sea surface microlayer. Bacteria within this layer were sampled using a membrane filter technique and bacterial diversity was compared with that in the underlying pelagic coastal seawater using molecular ecological techniques. 16S rRNA gene libraries of ≈ 500 clones were constructed from both bacterioneuston and the pelagic water...
Summary Movile Cave is an unusual groundwater ecosystem that is supported by in situ chemoautotrophic production. The cave atmosphere contains 1–2% methane (CH 4 ), although much higher concentrations are found in gas bubbles that keep microbial mats afloat on the water surface. As previous analyses of stable carbon isotope ratios have suggested that methane oxidation occurs in this environment, we hypothesized that aerobic me...
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