J. D. Ray results 84
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Little difference in the carbon balance of ryegrass/white clover- and plantain-dominated swards under dairy grazingNARA Subscribed
Incorporating plantain into grazed pasture swards is proposed as an approach to reduce nitrate leaching and nitrous oxide emissions. However, consideration must be given to potential emission-swapping, such as a reduction in soil carbon (C), which can contribute to increases in atmospheric CO 2 . We compared the net ecosystem C balance (NECB) of two adjacent newly-sown paddocks (~ 3 ha each) of (i) traditional ryegrass and whi...
Bottom‐tow gear fisheries (trawls and dredges) produce ~24 million mt of harvest annually, representing a globally important animal‐sourced food system. While many are currently sustainably managed, growing concern over the potential for ecosystem impacts from bottom‐tow gears has increased pressure to improve these fisheries. We assembled an international working group of > 30 contributors, including fishing industry particip...
Flagellicaudatan sauropods are well known for their elongated tails which end in a ‘whiplash’-like structure, consisting of biconvex rod-like caudal vertebrae lacking a neural arch. A remarkably well-preserved and relatively complete specimen of Barosaurus from the Upper Jurassic Morrison Formation preserves a number of these vertebrae, including the last two that terminate the axial series. The penultimate element preserves a...
NCBI Orthologs: Public Resource and Scalable Method for Computing High-Precision Orthologs Across Eukaryotic GenomesNARA Subscribed
Orthologs are fundamental for enabling comparative genomics analyses that further our understanding of eukaryotic biology. The unprecedented increase in the availability of high-quality eukaryotic genomes necessitates scalable and accurate methods for orthology inference. The National Center for Biotechnology Information (NCBI) developed “NCBI Orthologs”, a resource and a computational pipeline designed to meet this challenge...
The simultaneous occurrence of heatwaves and droughts is becoming more frequent and intense under climate change, particularly affecting vulnerable regions like Northeast Brazil (NEB). This study presents a comprehensive assessment of these compound extremes using long‐term in situ observations and ERA5 reanalysis. Heatwaves were defined by daily temperatures exceeding the 90th percentile, and droughts by the standardised prec...
Investigating impacts of the mycothiazole chemotype as a chemical probe for the study of mitochondrial function and agingNARA Subscribed
Small molecule inhibitors of the mitochondrial electron transport chain (ETC) hold significant promise to provide valuable insights to the field of mitochondrial research and aging biology. In this study, we investigated two molecules: mycothiazole (MTZ) - from the marine sponge C. mycofijiensis and its more stable semisynthetic analog 8- O -acetylmycothiazole (8-OAc) as potent and selective chemical probes based on their high...
Does urbanisation lead to parallel demographic shifts across the world in a cosmopolitan plant?NARA Subscribed
Urbanisation is occurring globally, leading to dramatic environmental changes that are altering the ecology and evolution of species. In particular, the expansion of human infrastructure and the loss and fragmentation of natural habitats in cities is predicted to increase genetic drift and reduce gene flow by reducing the size and connectivity of populations. Alternatively, the ‘urban facilitation model’ suggests that some spe...
Offsets in tide-gauge reference levels detected by satellite altimetry: ten case studiesNARA Subscribed
Comparing measurements of absolute sea level by satellite altimetry and relative sea level by a tide gauge can reveal errors in either measurement system. Combining the measurements can determine vertical land motion (VLM) at the tide gauge. We here discuss ten case studies in which a tide gauge has likely experienced a small ( $$\le 10$$ ≤ 10 cm), discontinuous offset in the vertical, suggesting inadvertent loss of reference-...
Mechanistic forecasts of species responses to climate change: The promise of biophysical ecologyNARA Subscribed
A core challenge in global change biology is to predict how species will respond to future environmental change and to manage these responses. To make such predictions and management actions robust to novel futures, we need to accurately characterize how organisms experience their environments and the biological mechanisms by which they respond. All organisms are thermodynamically connected to their environments through the ex...
Protecting pollinators and our food supply: understanding and managing threats to pollinator healthNARA Subscribed
Global pollinator declines threaten food production and natural ecosystems. The drivers of declines are complicated and driven by numerous factors such as pesticide use, loss of habitat, rising pathogens due to commercial bee keeping and climate change. Halting and reversing pollinator declines will require a multidisciplinary approach and international cooperation. Here, we summarize 20 presentations given in the symposium ‘P...
Bridge to the future: Important lessons from 20 years of ecosystem observations made by the OzFlux networkNARA Subscribed
In 2020, the Australian and New Zealand flux research and monitoring network, OzFlux, celebrated its 20 th anniversary by reflecting on the lessons learned through two decades of ecosystem studies on global change biology. OzFlux is a network not only for ecosystem researchers, but also for those ‘next users’ of the knowledge, information and data that such networks provide. Here, we focus on eight lessons across topics of cli...
Historic shipwrecks function as habitats for benthic organisms by providing food, refuge, and structure. They also form islands of biodiversity on the seabed, shaping microbial ecology and ecosystem processes. This study examined two wooden deep‐sea shipwrecks at 525 and 1800 m water depth and probed their influence on sediment microbiomes and geochemistry. Microbiomes were investigated with 16S rRNA gene amplicon sequencing a...
Common, low-frequency, rare, and ultra-rare coding variants contribute to COVID-19 severityNARA Subscribed
The combined impact of common and rare exonic variants in COVID-19 host genetics is currently insufficiently understood. Here, common and rare variants from whole-exome sequencing data of about 4000 SARS-CoV-2-positive individuals were used to define an interpretable machine-learning model for predicting COVID-19 severity. First, variants were converted into separate sets of Boolean features, depending on the absence or the pr...
Large‐scale genome sampling reveals unique immunity and metabolic adaptations in batsNARA Subscribed
Comprising more than 1,400 species, bats possess adaptations unique among mammals including powered flight, unexpected longevity, and extraordinary immunity. Some of the molecular mechanisms underlying these unique adaptations includes DNA repair, metabolism and immunity. However, analyses have been limited to a few divergent lineages, reducing the scope of inferences on gene family evolution across the Order Chiroptera. We co...