Jane Collins results 33
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Nutrient Enrichment Increases Grassland Biomass Sensitivity to Interannual Precipitation VariationNARA Subscribed
Primary production underpins much of ecosystem functioning and is often limited by nutrient and water availability. Ongoing global increases in nutrient inputs and interannual precipitation variability are thus likely to impact primary production, with unclear consequences for interannual variability in plant biomass. We used data from 35 grasslands in the Nutrient Network coordinated fertilization experiment to test if nutrie...
Heavy prenatal alcohol exposure is associated with changes to the brain’s white matter, which may underpin attention problems observed in this population. Less is known about the effect of low to moderate exposure. This study investigated white matter correlates of attention in children with low to moderate levels of prenatal alcohol exposure and controls whose mothers abstained from alcohol. We also examined whether associati...
Application of fin tissue for nonlethal stable isotope analysis of small-bodied fishesNARA Subscribed
Stable isotopes are commonly used to characterize food web structure and resource use by aquatic organisms. White muscle is generally preferred for stable isotope analysis of fishes. However, obtaining white muscle tissue typically requires lethal take or invasive sampling techniques, which are undesirable for small-bodied species or those of conservation concern. We assessed the use of fish fin as a nonlethal alternative to m...
SNAPSHOT USA 2021: A third coordinated national camera trap survey of the U nited S tatesNARA Subscribed
SNAPSHOT USA is a multicontributor, long‐term camera trap survey designed to survey mammals across the United States. Participants are recruited through community networks and directly through a website application ( https://www.snapshot-usa.org/ ). The growing Snapshot dataset is useful, for example, for tracking wildlife population responses to land use, land cover, and climate changes across spatial and temporal scales. Her...
Exercise is a cornerstone of preventive medicine and a promising strategy to intervene on the biology of aging. Variation in the response to exercise is a widely accepted concept that dates back to the 1980s with classic genetic studies identifying sequence variations as modifiers of the VO 2 max response to training. Since that time, the literature of exercise response variance has been populated with retrospective analyses o...
Frozen in time: Rangewide genomic diversity, structure, and demographic history of relict American chestnut populationsNARA Subscribed
American chestnut ( Castanea dentata ) was once the most economically and ecologically important hardwood species in the eastern United States. In the first half of the 20th century, an exotic fungal pathogen— Cryphonectria parasitica —decimated the species, killing billions of chestnut trees. Two approaches to developing blight‐resistant American chestnut populations show promise, but both will require introduction of adaptiv...
Global change re‐structures alpine plant communities through interacting abiotic and biotic effectsNARA Subscribed
Global change is altering patterns of community assembly, with net outcomes dependent on species' responses to the abiotic environment, both directly and mediated through biotic interactions. Here, we assess alpine plant community responses in a 15‐year factorial nitrogen addition, warming and snow manipulation experiment. We used a dynamic competition model to estimate the density‐dependent and ‐independent processes underlyi...
Large structures are introduced into deep-water marine environments by several industrial activities, including hydrocarbon exploitation. Anthropogenic structures can alter ecosystem structure and functioning in many marine ecosystems but the responses on continental margins are poorly known. Here, we investigate the short-term response of benthic megafauna to the installation of a 56 km-long 30 cm diameter pipeline on the Ang...
Ocean deoxygenation, warming, and acidification resulting from global change and increasing nutrient inputs are major threats to marine ecosystems. Despite this, spatial and temporal patterns of oxygen availability and their impacts on marine life are understudied compared to warming and acidification, particularly in coastal tropical ecosystems. We measured the abundance of major groups of zooplankton in the context of five c...
During the breeding season, seabirds are central place foragers and in order to successfully rear chicks they must adjust their foraging behaviours to compensate for extrinsic factors. When foraging, arctic terns Sterna paradisaea are restricted to the first 50 cm of the water column and can only carry a few prey items back to their nests at once. In Iceland, where 20–30% of the global population breed, poor fledging success h...
Common, low-frequency, rare, and ultra-rare coding variants contribute to COVID-19 severityNARA Subscribed
The combined impact of common and rare exonic variants in COVID-19 host genetics is currently insufficiently understood. Here, common and rare variants from whole-exome sequencing data of about 4000 SARS-CoV-2-positive individuals were used to define an interpretable machine-learning model for predicting COVID-19 severity. First, variants were converted into separate sets of Boolean features, depending on the absence or the pr...
Meta‐Fish‐Lib : A generalised, dynamic DNA reference library pipeline for metabarcoding of fishesNARA Subscribed
The accuracy and reliability of DNA metabarcoding analyses depend on the breadth and quality of the reference libraries that underpin them. However, there are limited options available to obtain and curate the huge volumes of sequence data that are available on public repositories such as NCBI and BOLD. Here, we provide a pipeline to download, clean and annotate mitochondrial DNA sequence data for a given list of fish species....
In 2011, several non-governmental and government agencies established the Kenya Marine Mammal Network (KMMN) to provide a platform for the consistent collection of data on marine mammals along the Kenyan coast, identify areas of importance and engage marine users and the general public in marine mammal conservation. Prior to the KMMN, relatively little was known about marine mammals in Kenya, limiting conservation strategies....
TRY plant trait database – enhanced coverage and open accessNARA Subscribed
Plant traits—the morphological, anatomical, physiological, biochemical and phenological characteristics of plants—determine how plants respond to environmental factors, affect other trophic levels, and influence ecosystem properties and their benefits and detriments to people. Plant trait data thus represent the basis for a vast area of research spanning from evolutionary biology, community and functional ecology, to biodivers...