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Interpretable deep learning reveals spatiotemporal MRI features of brain aging that align with neurodegenerationNARA Subscribed
Cortical thinning and atrophy are hallmarks of brain aging that have been characterized using magnetic resonance imaging (MRI). Brain aging involves many neuroanatomic features whose effects on brain structure remain unexplored. To address this challenge, we trained interpretable deep neural networks (DNNs) to estimate brain age (BA) from T 1 -weighted ( T 1 w) MRI. By identifying MRI features unapparent to humans, DNNs can fi...
Spatial heterogeneity in density dependence across life‐history stages drives the dynamics of a bird metapopulationNARA Subscribed
Density‐dependent effects on individual vital rates play a critical role in determining a population's equilibrium size and rate of return following stochastic disturbances. In fragmented landscapes, spatial variation in density dependence across life‐history stages causes heterogeneity in limitations of population growth, which influences extinction‐persistence dynamics. As habitat loss leads to increased landscape fragmentat...
Alzheimer’s disease (AD) disproportionately affects women and carriers of the apolipoprotein E ε4 allele (APOE4), yet little is known about how sex and APOE interact to influence white matter (WM) integrity during disease progression. We integrated diffusion MRI and matched blood transcriptomic data to investigate these interactions and their underlying biological mechanisms. WM microstructure was quantified using diffusion te...
Decomposing Frequency Dependence on Selection and Population Growth: Implications for Carrying Capacity and MaladaptationNARA Subscribed
The phenotypes of individuals within a population create a dynamic social environment that influences phenotypic selection and population growth. Fluctuations in the frequencies of these phenotypes can influence population mean fitness and the relative fitness of phenotypes, and thus impact both population dynamics and phenotypic evolution. Various theoretical frameworks have been used to study the impact of frequency dependen...
Along the U.S. east coast, the widespread non-native red alga Gracilaria vermiculophylla provides habitat for an array of macroinvertebrates, including the eastern mudsnail Ilyanassa obsoleta . Though I. obsoleta tolerates a wide temperature range, increases in summer water temperatures may enhance mortality; furthermore, the presence of non-native algae in rising seawater temperatures could exacerbate harmful conditions. We t...
Predicting the progression of MCI and Alzheimer’s disease on structural brain integrity and other features with machine learningNARA Subscribed
Machine learning (ML) on structural MRI data shows high potential for classifying Alzheimer’s disease (AD) progression, but the specific contribution of brain regions, demographics, and proteinopathy remains unclear. Using Alzheimer’s Disease Neuroimaging Initiative (ADNI) data, we applied an extreme gradient-boosting algorithm and SHAP (SHapley Additive exPlanations) values to classify cognitively normal (CN) older adults, th...
Sea trout, the anadromous ecotype of the species Salmo trutta , are subject to multiple threats, including exploitation and aquaculture impacts in the marine environment, habitat fragmentation and pollution in freshwaters, loss of genetic resilience due to interbreeding with hatchery strains and environmental change. Small streams contribute relatively little biomass to European sea trout stocks but are thought to be important...
Site‐Specific Nutrient Data Reveal the Importance of Soils in Driving the Mycorrhizal Make‐Up of Woody Vegetation WorldwideNARA Subscribed
Aim Arbuscular mycorrhizas (AM) and ectomycorrhizas (ECM) have different impacts on nutrient cycling, carbon storage, community dynamics and enhancement of photosynthesis by rising CO 2 . Recent global analyses have concluded that patterns of AM/ECM dominance in forests worldwide are shaped by climate, with soil nutrients contributing negligible additional explanatory power. However, their reliance on nutrient data from GIS su...
The Relationship Between Maturation Size and Maximum Tree Size From Tropical to Boreal ClimatesNARA Subscribed
The fundamental trade‐off between current and future reproduction has long been considered to result in a tendency for species that can grow large to begin reproduction at a larger size. Due to the prolonged time required to reach maturity, estimates of tree maturation size remain very rare and we lack a global view on the generality and the shape of this trade‐off. Using seed production from five continents, we estimate tree...
Purpose of Review Environmental chemical exposures may disrupt child development, with long-lasting health impacts. To date, U.S. studies of early environmental exposures have been limited in size and diversity, hindering power and generalizability. With harmonized data from over 60,000 participants representing 69 pregnancy cohorts, the National Institutes of Health’s Environmental influences on Child Health Outcomes (ECHO) P...