Justin Baker results 37
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Acorn review: Biochar and its applications in US forestryNARA Subscribed
Managed forests, including plantation systems, play a vital and often underappreciated role in contributing to the global carbon sink and mitigating climate change, and determining the most effective mitigation strategies requires accounting methods that accurately assess the climate effects of forests. We use a dynamic life cycle assessment methodology to compare the climate effects of thirty-six forest management scenarios (...
Interpretable deep learning reveals spatiotemporal MRI features of brain aging that align with neurodegenerationNARA Subscribed
Cortical thinning and atrophy are hallmarks of brain aging that have been characterized using magnetic resonance imaging (MRI). Brain aging involves many neuroanatomic features whose effects on brain structure remain unexplored. To address this challenge, we trained interpretable deep neural networks (DNNs) to estimate brain age (BA) from T 1 -weighted ( T 1 w) MRI. By identifying MRI features unapparent to humans, DNNs can fi...
Alzheimer’s disease (AD) disproportionately affects women and carriers of the apolipoprotein E ε4 allele (APOE4), yet little is known about how sex and APOE interact to influence white matter (WM) integrity during disease progression. We integrated diffusion MRI and matched blood transcriptomic data to investigate these interactions and their underlying biological mechanisms. WM microstructure was quantified using diffusion te...
Predicting the progression of MCI and Alzheimer’s disease on structural brain integrity and other features with machine learningNARA Subscribed
Machine learning (ML) on structural MRI data shows high potential for classifying Alzheimer’s disease (AD) progression, but the specific contribution of brain regions, demographics, and proteinopathy remains unclear. Using Alzheimer’s Disease Neuroimaging Initiative (ADNI) data, we applied an extreme gradient-boosting algorithm and SHAP (SHapley Additive exPlanations) values to classify cognitively normal (CN) older adults, th...
Transdisciplinary Collaborations for Advancing Sustainable and Resilient Agricultural SystemsNARA Subscribed
Feeding the growing human population sustainably amidst climate change is one of the most important challenges in the 21st century. Current practices often lead to the overuse of agronomic inputs, such as synthetic fertilizers and water, resulting in environmental contamination and diminishing returns on crop productivity. The complexity of agricultural systems, involving plant‐environment interactions and human management, pr...
Natural Canopy Disturbance Patterns and Ecological Silviculture in the Alabama Fall Line HillsNARA Subscribed
As a natural disturbance-based approach to silviculture is increasingly embraced by forest managers, quantitative reference conditions of natural disturbance patterns are paramount. We used LiDAR data to quantify resultant structural patterns from an EF3 tornado on the Oakmulgee Ranger District of Talladega National Forest in the Alabama Fall Line Hills, USA. We found the zone of catastrophic disturbance totaled 123 ha, had a...
Critical Market Tipping Points for High-Grade White Oak Inventory Decline in the Central Hardwood Region of the United StatesNARA Subscribed
This study expands the spatial scope of the Subregional Timber Supply (SRTS) model to include states in the central hardwood region and examine critical market tipping points of high-grade (large diameter) white oak under a set of illustrative scheduled demand scenarios. In light of the growing concern for future white oak timber supply, we illustrate the sensitivity of future inventory tipping points to market structure and p...
Contributions of healthier diets and agricultural productivity toward sustainability and climate goals in the United StatesNARA Subscribed
Meeting ambitious climate targets will require deploying the full suite of mitigation options, including those that indirectly reduce greenhouse-gas (GHG) emissions. Healthy diets have sustainability co-benefits by directly reducing livestock emissions as well as indirectly reducing land use emissions. Increased crop productivity could indirectly avoid emissions by reducing cropland area. However, there is disagreement on the...
There is an urgent need for countries to transition their national food and land-use systems toward food and nutritional security, climate stability, and environmental integrity. How can countries satisfy their demands while jointly delivering the required transformative change to achieve global sustainability targets? Here, we present a collaborative approach developed with the FABLE—Food, Agriculture, Biodiversity, Land, and...
Joint effects of climate, tree size, and year on annual tree growth derived from tree‐ring records of ten globally distributed forestsNARA Subscribed
Tree rings provide an invaluable long‐term record for understanding how climate and other drivers shape tree growth and forest productivity. However, conventional tree‐ring analysis methods were not designed to simultaneously test effects of climate, tree size, and other drivers on individual growth. This has limited the potential to test ecologically relevant hypotheses on tree growth sensitivity to environmental drivers and...
Climate Change Implications for Tidal Marshes and Food Web Linkages to Estuarine and Coastal NektonNARA Subscribed
Climate change is altering naturally fluctuating environmental conditions in coastal and estuarine ecosystems across the globe. Departures from long-term averages and ranges of environmental variables are increasingly being observed as directional changes [e.g., rising sea levels, sea surface temperatures (SST)] and less predictable periodic cycles (e.g., Atlantic or Pacific decadal oscillations) and extremes (e.g., coastal fl...
The global abundance of tree palmsNARA Subscribed
Aim Palms are an iconic, diverse and often abundant component of tropical ecosystems that provide many ecosystem services. Being monocots, tree palms are evolutionarily, morphologically and physiologically distinct from other trees, and these differences have important consequences for ecosystem services (e.g., carbon sequestration and storage) and in terms of responses to climate change. We quantified global patterns of tree...