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YES Oklahoma: Building Pathways into Cancer Research and Public Health for Indigenous High School StudentsNARA Subscribed
Youth Enjoy Science (YES) Oklahoma (OK) Scholars is an eight-week summer program that engages American Indian high school students in cancer and biomedical research. YES OK uses a relational, place-informed educational model, with a curriculum that emphasizes (1) increasing cancer biology and public health knowledge, (2) developing laboratory and scientific communication skills, (3) strengthening college and career preparation...
Marine megafauna species are affected by a wide range of anthropogenic threats. To evaluate the risk of such threats, species’ vulnerability to each threat must first be determined. We build on the existing threats classification scheme and ranking system of the International Union for Conservation of Nature (IUCN) Red List of Threatened Species by assessing the vulnerability of 256 marine megafauna species to 23 at‐sea threat...
Motivation Here, we make available a second version of the BioTIME database, which compiles records of abundance estimates for species in sample events of ecological assemblages through time. The updated version expands version 1.0 of the database by doubling the number of studies and includes substantial additional curation to the taxonomic accuracy of the records, as well as the metadata. Moreover, we now provide an R packag...
The Toxicology Investigators Consortium 2023 Annual ReportNARA Subscribed
Aim In northern environments, periods of isolation during Pleistocene glaciations and subsequent recolonization and secondary contact have had a significant influence on contemporary diversity of many species. The recent advent of high‐resolution genomic analyses allows unprecedented power to resolve genomic signatures of such events in northern species. Here, we provide the highest resolution genomic characterization of Atlan...
Arctic char ( Salvelinus alpinus ) is a facultatively anadromous fish species that is critically important to many Inuit communities in the Canadian Arctic. Plasticity in life history has allowed the species to persist in a diversity of challenging Holarctic environments. Despite their ecological and cultural importance and their presence in aquatic ecosystems that are ice‐covered for much of the year, few under‐ice studies of...
Common, low-frequency, rare, and ultra-rare coding variants contribute to COVID-19 severityNARA Subscribed
The combined impact of common and rare exonic variants in COVID-19 host genetics is currently insufficiently understood. Here, common and rare variants from whole-exome sequencing data of about 4000 SARS-CoV-2-positive individuals were used to define an interpretable machine-learning model for predicting COVID-19 severity. First, variants were converted into separate sets of Boolean features, depending on the absence or the pr...
Paternally‐biased gene expression follows kin‐selected predictions in female honey bee embryosNARA Subscribed
The Kinship Theory of Genomic Imprinting (KTGI) posits that, in species where females mate with multiple males, there is selection for a male to enhance the reproductive success of his offspring at the expense of other males and his mating partner. Reciprocal crosses between honey bee subspecies show parent‐of‐origin effects for reproductive traits, suggesting that males modify the expression of genes related to female functio...
Motivation The BioTIME database contains raw data on species identities and abundances in ecological assemblages through time. These data enable users to calculate temporal trends in biodiversity within and amongst assemblages using a broad range of metrics. BioTIME is being developed as a community‐led open‐source database of biodiversity time series. Our goal is to accelerate and facilitate quantitative analysis of temporal...
We highlight improvements to the International Comprehensive Ocean‐Atmosphere Data Set ( ICOADS ) in the latest Release 3.0 ( R3 .0; covering 1662–2014). ICOADS is the most widely used freely available collection of surface marine observations, providing data for the construction of gridded analyses of sea surface temperature, estimates of air–sea interaction and other meteorological variables. ICOADS observations are assimila...
ICOADS Release 2.5: extensions and enhancements to the surface marine meteorological archiveNARA Subscribed
Release 2.5 of the International Comprehensive Ocean‐Atmosphere Data Set (ICOADS) is a major update (covering 1662–2007) of the world's most extensive surface marine meteorological data collection. Building on extensive national and international partnerships, many new and improved contributing datasets have been processed into a uniform format and combined with the previous Release 2.4. The new data range from early non‐instr...