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Comparative Transcriptomic Analyses Identify Candidate Genes for Convergent Reproductive Shifts in a Bimodal Viviparous AmphibianNARA Subscribed
Shifts in reproductive mode represent key evolutionary innovations that shape species' life histories and evolutionary trajectories. Species showing bimodal reproductive strategies with multiple independent origins offer a rare opportunity to gain insights into the adaptive processes and mechanisms underlying convergent traits. The fire salamander, Salamandra salamandra , is the only amphibian exhibiting intraspecific variatio...
Mixed Support for Pleistocene Sea‐Level Fluctuations in Promoting the Diversification of Anole Lizards in the Northern Lesser AntillesNARA Subscribed
In the Pleistocene, climatic changes resulted in cycles of sea‐level fluctuation that periodically fragmented islands into aggregate island complexes. These temporary saltwater barriers between islands within an island bank had the potential to decrease migration between populations on separate islands, resulting in increased genetic divergence and potentially speciation. In the Lesser Antilles, Anolis lizards (anoles) are dis...
Collective behavior diverges independently of the benthic-limnetic axis in sticklebackNARA Subscribed
Comparing populations across replicate environments or habitat types can help us understand the role of ecology in evolutionary processes. If similar phenotypes are favored in similar environments, parallel evolution may occur. Collective behavior, including collective movement and social networks, can play a key role in the adaptation by animals to different environments. However, studies exploring the parallelism of collecti...
Motivation Here, we make available a second version of the BioTIME database, which compiles records of abundance estimates for species in sample events of ecological assemblages through time. The updated version expands version 1.0 of the database by doubling the number of studies and includes substantial additional curation to the taxonomic accuracy of the records, as well as the metadata. Moreover, we now provide an R packag...
Global Marine Flyways Identified for Long‐Distance Migrating Seabirds From Tracking DataNARA Subscribed
Aim To identify the broad‐scale oceanic migration routes (‘marine flyways’) used by multiple pelagic, long‐distance migratory seabirds based on a global compilation of tracking data. Location Global. Time Period 1989–2023. Major Taxa Studied Seabirds (Families: Phaethontidae, Hydrobatidae, Diomedeidae, Procellariidae, Laridae and Stercorariidae). Methods We collated a comprehensive global tracking dataset that included the mig...
Plants, pollinators and their interactions under global ecological change: The role of pollen DNA metabarcodingNARA Subscribed
Anthropogenic activities are triggering global changes in the environment, causing entire communities of plants, pollinators and their interactions to restructure, and ultimately leading to species declines. To understand the mechanisms behind community shifts and declines, as well as monitoring and managing impacts, a global effort must be made to characterize plant–pollinator communities in detail, across different habitat t...
Multi-modal MRI of hippocampal morphometry and connectivity after pediatric severe TBINARA Subscribed
This investigation explores memory performance using the California Verbal Learning Test in relation to morphometric and connectivity measures of the memory network in severe traumatic brain injury. Twenty-two adolescents with severe traumatic brain injury were recruited for multimodal MRI scanning 1–2 years post-injury at 13 participating sites. Analyses included hippocampal volume derived from anatomical T1-weighted imaging,...
Genomic erosion in a demographically recovered bird species during conservation rescueNARA Subscribed
The pink pigeon ( Nesoenas mayeri ) is an endemic species of Mauritius that has made a remarkable recovery after a severe population bottleneck in the 1970s to early 1990s. Prior to this bottleneck, an ex situ population was established from which captive‐bred individuals were released into free‐living subpopulations to increase population size and genetic variation. This conservation rescue led to rapid population recovery to...
Comprehensive analysis of epigenetic clocks reveals associations between disproportionate biological ageing and hippocampal volumeNARA Subscribed
The concept of age acceleration, the difference between biological age and chronological age, is of growing interest, particularly with respect to age-related disorders, such as Alzheimer’s Disease (AD). Whilst studies have reported associations with AD risk and related phenotypes, there remains a lack of consensus on these associations. Here we aimed to comprehensively investigate the relationship between five recognised meas...
Prolonging survival in good health is a fundamental societal goal. However, the leading determinants of disability-free survival in healthy older people have not been well established. Data from ASPREE, a bi-national placebo-controlled trial of aspirin with 4.7 years median follow-up, was analysed. At enrolment, participants were healthy and without prior cardiovascular events, dementia or persistent physical disability. Disab...
Systems analysis of miRNA biomarkers to inform drug safetyNARA Subscribed
microRNAs (miRNAs or miRs) are short non-coding RNA molecules which have been shown to be dysregulated and released into the extracellular milieu as a result of many drug and non-drug-induced pathologies in different organ systems. Consequently, circulating miRs have been proposed as useful biomarkers of many disease states, including drug-induced tissue injury. miRs have shown potential to support or even replace the existing...
Speciation and secondary contact in a fossorial island endemic, the São Tomé caecilianNARA Subscribed
A period of isolation in allopatry typically precedes local adaptation and subsequent divergence among lineages. Alternatively, locally adapted phenotypes may arise and persist in the face of gene flow, resulting in strong correlations between ecologically‐relevant phenotypic variation and corresponding environmental gradients. Quantifying genetic, ecological, and phenotypic divergence in such lineages can provide insights int...
Marine biota are redistributing at a rapid pace in response to climate change and shifting seascapes. While changes in fish populations and community structure threaten the sustainability of fisheries, our capacity to adapt by tracking and projecting marine species remains a challenge due to data discontinuities in biological observations, lack of data availability, and mismatch between data and real species distributions. To...
The sensitivity of tropical cyclone (TC) projection results to different models and the detection and tracking scheme used is well established. In this study, future climate projections of TC activity in the North Indian Ocean (NIO) are assessed with a model‐ and basin‐independent detection and tracking scheme. The scheme is applied to selected models from the coupled model intercomparison project phase 5 (CMIP5) experiments f...
Quantitative and qualitative assessment of pollen DNA metabarcoding using constructed species mixturesNARA Subscribed
Pollen DNA metabarcoding—marker‐based genetic identification of potentially mixed‐species pollen samples—has applications across a variety of fields. While basic species‐level pollen identification using standard DNA barcode markers is established, the extent to which metabarcoding (a) correctly assigns species identities to mixes (qualitative matching) and (b) generates sequence reads proportionally to their relative abundanc...
Cooperative breeding decreases the direct reproductive output of subordinate individuals, but cooperation can be evolutionarily favored when there are challenges or constraints to breeding independently. Environmental factors, including temperature, precipitation, latitude, high seasonality, and environmental harshness have been hypothesized to correlate with the presence of cooperative breeding. However, to test the relations...