Cynoglossus semilaevis parvovirus (CsPV) is an important pathogen that poses a serious threat to the aquaculture industry. In the absence of vaccines and effective therapeutic drugs, early and sensitive detection of the pathogen is the key measure to prevent and control the outbreaks and epidemics of viral diseases. Currently, the existing detection methods for CsPV are expensive and rely on specialized operations, limiting th...

In recent decades, global warming‐driven ocean stratification has profoundly affected nutrient cycling. As the largest marginal sea in the northwestern Pacific, the South China Sea (SCS) provides a representative setting to examine these responses. Based on two decades of temperature, salinity, and nutrient datasets, we quantified the evolution of stratification in the SCS, its impacts on the upward transport of deep‐water pho...

A new species in Diaporthaceae, Diaporthe fengtaiensis sp. nov., is described and illustrated from Southwestern China. A comparative morpho‐anatomical study and multilocus phylogenetic analysis (ITS, CAL , HIS , TEF1‐α , TUB2 ) confirmed its position within the section Betulicola of the genus Diaporthe . The taxon is characterized by immersed ascomata (270–420 × 290–410 µm), relatively large asci (70–115 × 9.5–13.5 µm), and 1‐...

Primates, 69% of which are threatened with extinction, are the third most specious order of mammals. We used primates as model taxa to examine the umbrella effects of primates on ecosystem services and the protection of other vertebrates and seed plants in Yunnan Province, China. We identified areas of conservation priority for 16 primate species and determined which other threatened and endemic terrestrial vertebrates and see...

Suaeda salsa L. is a typical halophyte with high value as a vegetable. Here, we report a 447.98 Mb, chromosomal‐level genome of S. salsa , assembled into nine pseudomolecules (contig N50 = 1.36 Mb) and annotated with 27,927 annotated protein‐coding genes. Most of the assembled S. salsa genome, 58.03%, consists of transposable elements. Some gene families including HKT1 , NHX , SOS and CASP related to salt resistance were signi...

A new corticioid fungal species Gloeocystidiellum sinense from Yunnan Province, is described and illustrated based on morphological and molecular evidence. This species is characterised by its cream to pink‐buff hymenial surface, a monomitic hyphal system, and ellipsoid basidiospores measuring as 3.7–4.4 × 2.8–3.2 µm. The phylogenetic analyses inferred from ITS + nLSU dataset indicated that the new species G. sinense nested wi...

Microbes in the sea surface microlayer (SML) are key to connecting the ocean and the atmosphere, affecting the exchange of matter, momentum, and heat at the interface. However, their sources have never been quantified systematically. Seawater has long been deemed their major source, whereas atmospheric deposition is regarded as trivial or merely providing additional nutrients. Here, combining atmospheric observations and quant...

Green manuring and crop straw returning are widely used to increase soil organic carbon (SOC) sequestration, while the pathways and drivers in native SOC mineralization and new SOC formation after implementing these practices remain unclear. Here, through a 10‐locations' network field experiment in southern China, the effects of green manuring (Mv), rice straw returning (Rs), and their combination (MR) on soil C sequestration...

The southeastern edge of the Qinghai‐Tibet Plateau (Yunnan, China) exhibits high biodiversity but stark differences in species richness between its western Longitudinal Range Gorge (LRG) and eastern Yunnan Plateau (YP). We collected distribution data for 16 primate species in Yunnan and analyzed palynological records over the past 20 ka from 21 localities to identify the biogeographic, climatic, and anthropogenic factors that...

Leaf photosynthesis and respiration are two of the largest carbon fluxes between the atmosphere and biosphere. Although experiments examining the warming effects on photosynthetic and respiratory thermal acclimation have been widely conducted, the sensitivity of various ecosystem and vegetation types to warming remains uncertain. Here we conducted a meta‐analysis on experimental observations of thermal acclimation worldwide. W...

Biological invasions pose a global challenge, affecting ecosystems worldwide and human societies. Knowledge of the evolutionary history of invasive species is critical to understanding their current invasion success and projecting their future spread. However, to date, few studies have addressed the evolutionary history and potential future spread of invaders simultaneously. In this study, we explored both evolutionary history...

Antarctic krill Euphausia superba is a key species in the Southern Ocean ecosystem and has important ecological value. It is also one of the main fishery resources in the Southern Ocean with high economic value. In recent years, with the development of krill fishery and rapid climate change, the conservation and management of krill resources have faced unprecedented challenges. The krill resource is different from the general...

Aim Knowledge of taxonomy and species distributions in highly diverse lineages of invertebrates remains too incomplete for the study of biogeographical patterns at the global scale. This limits the understanding of processes leading to the formation and maintenance of boundaries between major biogeographical realms. Site‐based metagenomic approaches may provide an alternative source of data for inference of historical processe...

Reliable maps of species distributions are fundamental for biodiversity research and conservation. The International Union for Conservation of Nature (IUCN) range maps are widely recognized as authoritative representations of species’ geographic limits, yet they might not always align with actual occurrence data. In recent area of habitat (AOH) maps, areas that are not habitat have been removed from IUCN ranges to reduce commi...

Aim Species–area relationships (SAR) are widely utilized for estimating the species richness and its spatial turnover across various scales. Despite the prevalent characterization of SAR using the power law in many microbial community studies, its efficacy remains unvalidated. This study aims to characterize the microbial SAR and its mechanisms in alpine grassland soils on the Qinghai‐Tibet Plateau (QTP). Location Qinghai‐Tibe...

Human activity and climate change affect biodiversity and cause species range shifts, contractions, and expansions. Globally, human activities and climate change have emerged as persistent threats to biodiversity, leading to approximately 68% of the ~522 primate species being threatened with extinction. Here, we used habitat suitability models and integrated data on human population density, gross domestic product (GDP), road...

The Southern Hemisphere Annular Mode (SAM) is the dominant mode of atmospheric circulation in the Southern Hemisphere extratropical region. In the late 20th century, the SAM underwent a remarkable positive trend, with the strongest trend occurring in austral summer because of Antarctic ozone depletion. In this study, we quantitatively explore changes in the seasonality of the SAM trend under the background of ozone recovery. A...

Horizontally transferred genes (HTGs) play a key role in animal symbiosis, and some horizontally transferred genes or proteins are highly expressed in specialized host cells (bacteriocytes). However, it is not clear how HTGs are regulated, but microRNAs (miRNAs) are prime candidates given their previously demonstrated roles in symbiosis and impacts on the expression of host genes. A horizontally acquired PanBC that is highly e...

Summary Aspergillus flavus is an opportunistic fungal pathogen that colonizes agriculture crops with aflatoxin contamination. We found that Perillaldehyde (PAE) effectively inhibited A . flavus viability and aflatoxin production by inducing excess reactive oxygen species (ROS). Transcriptome analysis indicated that the Gα protein FadA was significantly induced by PAE. Functional characterization of FadA showed it is important...

Summary As the most abundant and genetically diverse biological entities, viruses significantly influence ecological, biogeographical and evolutionary processes in the ocean. However, the biogeography of marine viruses and the drivers shaping viral community are unclear. Here, the biogeographic patterns of T4‐like viruses and the relative impacts of deterministic (environmental selection) and dispersal (spatial distance) proce...

Aquaculture is a fast‐growing and rapidly expanding industry in the world. Probiotics are widely used in aquaculture and have provided benefits to aquatic animal health, and it is also a promising alternative to antibiotics for control of fish diseases. With the development of biotechnology, new expression systems and novel techniques for the surface display of heterologous proteins in surface of probiotics cells have been dev...

The dryness/wetness patterns are a significant reference for stakeholders in developing reasonable strategies in regard to water resource management, prediction, prevention of extreme events, and management of agricultural activities; however, no attempts have been made to systematically quantify the dryness/wetness patterns and drought conditions over the Three‐River Headwater Region (TRHR) of China, where the ecosystem is hi...

Summary The HprK serine kinase is a component of the phosphoenolpyruvate phosphotransferase system (PTS) of bacteria that generally regulates catabolite repression through phosphorylation/dephosphorylation of the PTS protein PtsH at a conserved serine residue. However, many bacteria do not encode a complete PTS or even have an HprK homologue. Xanthomonas campestris pv. campestris ( Xcc ) is a pathogen that cause black rot dise...

In this study, the performances of 31 global climate models (GCMs) from Coupled Model Intercomparison Project Phase 5 (CMIP5) were evaluated using observed temperature and precipitation data sets for mainland Southeast Asia (MSA). In addition, the technique for order preference by similarity to ideal solution model (TOPSIS), which is an effective multi‐objective decision method and has been widely applied in systems engineerin...

Summary Colorectal cancer (CRC) is a common disease worldwide that is strongly associated with the gut microbiota. However, little is known regarding the gut microbiota after surgical treatment. 16S rRNA gene sequencing was used to evaluate differences in gut microbiota among colorectal adenoma patients, CRC patients, CRC postoperative patients and healthy controls by comparing gut microbiota diversity, overall composition and...