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Summary Thousands of hot springs are located in the north‐eastern part of the Y unnan– T ibet geothermal zone, which is one of the most active geothermal areas in the world. However, a comprehensive and detailed understanding of microbial diversity in these hot springs is still lacking. In this study, bacterial and archaeal diversities were investigated in 16 hot springs ( pH 3.2–8.6; temperature 47–96° C ) in Y unnan P rovinc...