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Five years of national airborne pollen monitoring in South Africa: biome-specific calendars to inform allergy diagnosis and preventionNARA Subscribed
Pollen monitoring is crucial for understanding seasonal patterns, supporting allergy diagnosis and informing early warning tools to mitigate allergic diseases. The Southern Hemisphere lacks long-term pollen seasonal data, with extremely few records from Africa. We present pollen calendars based on five years of data from South Africa. Airborne pollen from 2019 to 2024 across South African biomes was collected in seven cities u...
Bioacoustic Baselines for Intact ForestsNARA Subscribed
Forests are at the frontline of both climate and biodiversity crises: forests are fundamental to the regulation of Earth's atmospheric carbon dioxide levels, and tropical forests alone harbour over half of all terrestrial species. Consequently, forests are at the centre of global efforts to both prevent extinctions of species and sequester carbon to mitigate climate change. Most carbon sequestration initiatives do not measure...
Interpretable deep learning reveals spatiotemporal MRI features of brain aging that align with neurodegenerationNARA Subscribed
Cortical thinning and atrophy are hallmarks of brain aging that have been characterized using magnetic resonance imaging (MRI). Brain aging involves many neuroanatomic features whose effects on brain structure remain unexplored. To address this challenge, we trained interpretable deep neural networks (DNNs) to estimate brain age (BA) from T 1 -weighted ( T 1 w) MRI. By identifying MRI features unapparent to humans, DNNs can fi...
Acoustic Indices Reveal Fundamental Differences in Daily Phenology of Tropical and Temperate Forest SoundscapesNARA Subscribed
Aim Forests support the majority of the planet's terrestrial biodiversity, and in recent years the characterisation of soundscapes has emerged as a powerful tool for understanding forest ecosystems, both in terms of ecology and for the purpose of conservation. But it is still poorly understood to what extent generalisations can be made about soundscapes in different parts of the world, and to what extent we should expect sound...
Alzheimer’s disease (AD) disproportionately affects women and carriers of the apolipoprotein E ε4 allele (APOE4), yet little is known about how sex and APOE interact to influence white matter (WM) integrity during disease progression. We integrated diffusion MRI and matched blood transcriptomic data to investigate these interactions and their underlying biological mechanisms. WM microstructure was quantified using diffusion te...
While Lucayan exploitation of their marine environment is relatively well understand, less is known about terrestrial resource utilization, particularly of the floristic environment. Lucayans are the earliest permanent Indigenous inhabitants of the Bahama archipelago, which has suffered significant terrestrial habitat changes through time due to natural and anthropogenic factors. In this study we examined 878 wood charcoal spe...
Predicting the progression of MCI and Alzheimer’s disease on structural brain integrity and other features with machine learningNARA Subscribed
Machine learning (ML) on structural MRI data shows high potential for classifying Alzheimer’s disease (AD) progression, but the specific contribution of brain regions, demographics, and proteinopathy remains unclear. Using Alzheimer’s Disease Neuroimaging Initiative (ADNI) data, we applied an extreme gradient-boosting algorithm and SHAP (SHapley Additive exPlanations) values to classify cognitively normal (CN) older adults, th...
Increasing multi-hazard climate risk and financial and health impacts on northern homeownersNARA Subscribed
Currently, more than half of the world’s human population lives in urban areas, which are increasingly affected by climate hazards. Little is known about how multi-hazard environments affect people, especially those living in urban areas in northern latitudes. This study surveyed homeowners in Anchorage and Fairbanks, USA, Alaska’s largest urban centers, to measure individual risk perceptions, mitigation response, and damages...
Positive associations matter: Microbial relationships drive tick microbiome compositionNARA Subscribed
Untangling how factors such as environment, host, associations among bacterial species and dispersal predict microbial composition is a fundamental challenge. In this study, we use complementary machine‐learning approaches to quantify the relative role of these factors in shaping microbiome variation of the blacklegged tick Ixodes scapularis . I. scapularis is the most important vector for Borrelia burgdorferi (the causative a...
As a discipline, structural biology has been transformed by the three-dimensional electron microscopy (3DEM) “Resolution Revolution” made possible by convergence of robust cryo-preservation of vitrified biological materials, sample handling systems, and measurement stages operating a liquid nitrogen temperature, improvements in electron optics that preserve phase information at the atomic level, direct electron detectors (DEDs...
Measuring plankton and associated variables as part of ocean time-series stations has the potential to revolutionize our understanding of ocean biology and ecology and their ties to ocean biogeochemistry. It will open temporal scales (e.g., resolving diel cycles) not typically sampled as a function of depth. In this review we motivate the addition of biological measurements to time-series sites by detailing science questions t...
Phytoplankton photosynthetic physiology can be investigated through single-turnover variable chlorophyll fluorescence (ST-ChlF) approaches, which carry unique potential to autonomously collect data at high spatial and temporal resolution. Over the past decades, significant progress has been made in the development and application of ST-ChlF methods in aquatic ecosystems, and in the interpretation of the resulting observations....