This paper presents the open-source Python software OSADCP developed for the processing of vessel-mounted Acoustic Doppler Current Profiler (VMADCP) data. At this stage, the toolbox is designed for processing VMADCP measurements from open-ocean applications of Teledyne RDI Ocean Surveyor ADCPs and the data acquisition software VMDAS . Based on the VMDAS ENX binary output format, the software contains implementations for cleani...

Tidal asymmetry in estuaries and other tidally dominated coastal systems is commonly evaluated to assess system states or their development. Based on different methods, local states are classified as either flood or ebb dominant. An increasing number of descriptors for deriving tidal asymmetry in recent years calls for a comparison and discussion of their sensitivity on input data and its quality. We compared tidal asymmetry f...

In skeletal muscle, the Hippo effector Yap promotes satellite cell, myoblast, and rhabdomyoblast proliferation but prevents myogenic differentiation into multinucleated muscle fibres. We previously noted that Yap drives expression of the first enzyme of the serine biosynthesis pathway, phosphoglycerate dehydrogenase ( Phgdh ). Here, we examined the regulation and function of Phgdh in satellite cells and myoblasts and found tha...

Long, non-coding (Inc) RNAs emerge as crucial regulators of gene expression. Their ability to interact with DNA and protein mediates the recruitment of regulators to defined chromosomal loci. LncRNAs are particularly abundant in brain tissues where they are involved in cell specification. We described a novel lncRNA, RUS (RNA upstream to Slitrk3), which interacts with epigenetic regulators and contributes to shaping the gene e...

Impaired bone homeostasis caused by osteomyelitis provokes serious variations in the bone remodeling process, thereby involving multiple inflammatory cytokines to activate bone healing. We have previously established a mouse model for post-traumatic osteomyelitis and studied bone regeneration after sufficient debridement. Moreover, we could further characterize the postinfectious inflammatory state of bony defects after debrid...