Mike Jackson results 21
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Why primatology needs local knowledgeNARA Subscribed
Interpretable deep learning reveals spatiotemporal MRI features of brain aging that align with neurodegenerationNARA Subscribed
Cortical thinning and atrophy are hallmarks of brain aging that have been characterized using magnetic resonance imaging (MRI). Brain aging involves many neuroanatomic features whose effects on brain structure remain unexplored. To address this challenge, we trained interpretable deep neural networks (DNNs) to estimate brain age (BA) from T 1 -weighted ( T 1 w) MRI. By identifying MRI features unapparent to humans, DNNs can fi...
Alzheimer’s disease (AD) disproportionately affects women and carriers of the apolipoprotein E ε4 allele (APOE4), yet little is known about how sex and APOE interact to influence white matter (WM) integrity during disease progression. We integrated diffusion MRI and matched blood transcriptomic data to investigate these interactions and their underlying biological mechanisms. WM microstructure was quantified using diffusion te...
Predicting the progression of MCI and Alzheimer’s disease on structural brain integrity and other features with machine learningNARA Subscribed
Machine learning (ML) on structural MRI data shows high potential for classifying Alzheimer’s disease (AD) progression, but the specific contribution of brain regions, demographics, and proteinopathy remains unclear. Using Alzheimer’s Disease Neuroimaging Initiative (ADNI) data, we applied an extreme gradient-boosting algorithm and SHAP (SHapley Additive exPlanations) values to classify cognitively normal (CN) older adults, th...
Plant stable carbon (δ 13 C) and nitrogen (δ 15 N) isotope values can be used to directly investigate crop husbandry practices such as manuring; a key variable in understanding the scale and intensity of past farming practices. We present new results from a four-year experiment examining the impact of manuring on the δ 13 C and δ 15 N values of a heritage cultivar of the broad or faba bean ( Vicia faba ), the ‘Celtic black bro...
SNAPSHOT USA 2021: A third coordinated national camera trap survey of the U nited S tatesNARA Subscribed
SNAPSHOT USA is a multicontributor, long‐term camera trap survey designed to survey mammals across the United States. Participants are recruited through community networks and directly through a website application ( https://www.snapshot-usa.org/ ). The growing Snapshot dataset is useful, for example, for tracking wildlife population responses to land use, land cover, and climate changes across spatial and temporal scales. Her...
Early‐life immune expression profiles predict later‐life health and fitness in a wild rodentNARA Subscribed
Individuals differ in the nature of the immune responses they produce, affecting disease susceptibility and ultimately health and fitness. These differences have been hypothesized to have an origin in events experienced early in life that then affect trajectories of immune development and responsiveness. Here, we investigate how early‐life immune expression profiles influence life history outcomes in a natural population of fi...
Living with chronic infection: Persistent immunomodulation during avirulent haemoparasitic infection in a wild rodentNARA Subscribed
Apicomplexans are a protozoan phylum of obligate parasites which may be highly virulent during acute infections, but may also persist as chronic infections which appear to have little fitness cost. Babesia microti is an apicomplexan haemoparasite that, in immunocompromised individuals, can cause severe, potentially fatal disease. However, in its natural host, wild field voles ( Microtus agrestis ), it exhibits chronic infectio...
Apex predators can have substantial and complex ecological roles in ecosystems. However, differences in species‐specific traits, population densities, and interspecific interactions are likely to determine the strength of apex predators’ roles. Here we report complementary studies examining how interactions between predator per capita metabolic rate and population density influenced the biomass, population energy use, and ecol...
The city as a refuge for insect pollinatorsNARA Subscribed
Research on urban insect pollinators is changing views on the biological value and ecological importance of cities. The abundance and diversity of native bee species in urban landscapes that are absent in nearby rural lands evidence the biological value and ecological importance of cities and have implications for biodiversity conservation. Lagging behind this revised image of the city are urban conservation programs that hist...
Navigating the complexity of ecological stabilityNARA Subscribed
Human actions challenge nature in many ways. Ecological responses are ineluctably complex, demanding measures that describe them succinctly. Collectively, these measures encapsulate the overall ‘stability’ of the system. Many international bodies, including the Intergovernmental Science‐Policy Platform on Biodiversity and Ecosystem Services, broadly aspire to maintain or enhance ecological stability. Such bodies frequently use...
Evidence for selection at cytokine loci in a natural population of field voles ( Microtus agrestis )NARA Subscribed
Individuals in natural populations are frequently exposed to a wide range of pathogens. Given the diverse profile of gene products involved in responses to different types of pathogen, this potentially results in complex pathogen‐specific selection pressures acting on a broad spectrum of immune system genes in wild animals. Thus far, studies into the evolution of immune genes in natural populations have focused almost exclusiv...
The Business of Forest Enterprise / Urban EcosystemsNARA Subscribed
22In 2009, five unique methods were used to inspect vegetation-related conditions along Bonneville Power Administration (BPA) rights-of-way (ROW). Some methods were trials that BPA committed to execute as part of a settlement with its regional regulatory organization, the Western Electric Coordination Council (WECC), for violations of reliability standards from vegetation grow-in related outages. A combination of simple, strat...
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