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Conservation practitioners face the complex challenge of addressing global biodiversity threats within social-ecological systems with multiple jurisdictions, numerous interest groups, and changing environmental conditions. Bridging the research-to-implementation gap between scientists and managers, which integrates diverse perspectives that represent the variety of considerations impacting management outcomes can help to infor...
SNAPSHOT USA 2024: Year 6 of the Coordinated National Camera Trap Survey of the United StatesNARA Subscribed
Motivation SNAPSHOT USA is an annual, multi‐contributor camera trap survey of mammals across the United States. The growing SNAPSHOT USA dataset is intended for tracking the spatial and temporal responses of mammal populations to changes in land use, land cover and climate. These data will be useful for exploring the drivers of spatial and temporal changes in relative abundance and distribution, as well as the impacts of speci...
Experimental Immigration Mediates Ecological Selection and Drift in Monarch Microbiome AssemblyNARA Subscribed
The distribution of biodiversity depends on processes operating across scales, yet multiscale paradigms have struggled to permeate host‐microbiome research. Instead, host‐microbiome research has focused on host selection and has struggled to explain the high variation in microbial composition across individuals. By integrating multi‐scale ecological theory with experimental manipulation of bacteria colonizing monarch butterfly...
Species interactions structure ecological communities through direct and indirect pathways with ecosystem‐wide implications. Despite mounting interest in the importance of indirect interactions, empirical evidence remains limited. Here, we demonstrate the critical role of parasite‐mediated competition in driving community outcomes in a multi‐species system of conservation and management concern. We leveraged 2 years of detecti...
Effective conservation of migratory species relies on habitat protection throughout their annual cycle. Although protected areas (PAs) play a central role in conservation, their effectiveness at conserving habitats across the annual cycle of migratory species has rarely been assessed. We developed seasonal ecological niche models for 418 migratory butterfly species across their global distribution to assess whether they were a...
SNAPSHOT USA 2019–2023: The First Five Years of Data From a Coordinated Camera Trap Survey of the United StatesNARA Subscribed
Motivation SNAPSHOT USA is an annual, multicontributor camera trap survey of mammals across the United States. The growing SNAPSHOT USA dataset is intended for tracking the spatial and temporal responses of mammal populations to changes in land use, land cover and climate. These data will be useful for exploring the drivers of spatial and temporal changes in relative abundance and distribution, as well as the impacts of specie...
Abundance‐mediated species interactionsNARA Subscribed
Species interactions shape biodiversity patterns, community assemblage, and the dynamics of wildlife populations. Ecological theory posits that the strength of interspecific interactions is fundamentally underpinned by the population sizes of the involved species. Nonetheless, prevalent approaches for modeling species interactions predominantly center around occupancy states. Here, we use simulations to illuminate the inadequa...
Patterns of recovery in extant and extirpated seabirds after the world's largest multipredator eradicationNARA Subscribed
Eradicating invasive predators from islands can result in substantial recovery of seabirds, but the mechanisms that drive population changes remain poorly understood. Meta‐analyses have recently revealed that immigration is surprisingly important to the recovery of philopatric seabirds, but it is not known whether dispersal and philopatry interact predictably to determine rates of population growth and changes of distribution....
Current genome sequencing technologies have made it possible to generate highly contiguous genome assemblies for non-model animal species. Despite advances in genome assembly methods, there is still room for improvement in the delineation of specific gene features in the genomes. Here we present genome visualization and annotation tools to support seven livestock species (bovine, chicken, goat, horse, pig, sheep, and water buf...
Prolonging survival in good health is a fundamental societal goal. However, the leading determinants of disability-free survival in healthy older people have not been well established. Data from ASPREE, a bi-national placebo-controlled trial of aspirin with 4.7 years median follow-up, was analysed. At enrolment, participants were healthy and without prior cardiovascular events, dementia or persistent physical disability. Disab...
Common, low-frequency, rare, and ultra-rare coding variants contribute to COVID-19 severityNARA Subscribed
The combined impact of common and rare exonic variants in COVID-19 host genetics is currently insufficiently understood. Here, common and rare variants from whole-exome sequencing data of about 4000 SARS-CoV-2-positive individuals were used to define an interpretable machine-learning model for predicting COVID-19 severity. First, variants were converted into separate sets of Boolean features, depending on the absence or the pr...
A hybrid correlative‐mechanistic approach for modeling winter distributions of North American bat speciesNARA Subscribed
Aim The fungal pathogen Pseudogymnoascus destructans and resultant white‐nose syndrome (WNS) continues to advance across North America, infecting new bat hibernacula. Western North America hosts the highest bat diversity in the United States and Canada, yet little is known about hibernacula and hibernation behaviour in this region. An improved understanding of the distribution of suitable hibernacula is critical for land manag...
Seasonal spatial dynamics of butterfly migrationNARA Subscribed
Understanding the seasonal movements of migratory species underpins ecological studies. Several hundred butterfly species show migratory behaviour, yet the spatial pattern of these migrations is poorly understood. We developed climatic niche models for 405 migratory butterfly species globally to estimate patterns of seasonal movement and the distribution of seasonal habitat suitability. We found strong seasonal variation in ha...
Environmental specialization and cryptic genetic divergence in two massive coral species from the Florida Keys Reef TractNARA Subscribed
Broadcast‐spawning coral species have wide geographical ranges spanning strong environmental gradients, but it is unclear how much spatially varying selection these gradients actually impose. Strong divergent selection might present a considerable barrier for demographic exchange between disparate reef habitats. We investigated whether the cross‐shelf gradient is associated with spatially varying selection in two common coral...
With the accelerating pace of global change, it is imperative that we obtain rapid inventories of the status and distribution of wildlife for ecological inferences and conservation planning. To address this challenge, we launched the SNAPSHOT USA project, a collaborative survey of terrestrial wildlife populations using camera traps across the United States. For our first annual survey, we compiled data across all 50 states dur...