P. T. Callaghan results 17
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Common, low-frequency, rare, and ultra-rare coding variants contribute to COVID-19 severityNARA Subscribed
The combined impact of common and rare exonic variants in COVID-19 host genetics is currently insufficiently understood. Here, common and rare variants from whole-exome sequencing data of about 4000 SARS-CoV-2-positive individuals were used to define an interpretable machine-learning model for predicting COVID-19 severity. First, variants were converted into separate sets of Boolean features, depending on the absence or the pr...
Sex demographics alter the effect of habitat structure on predation by a temporary pond specialistNARA Subscribed
Habitat structure can profoundly influence interaction strengths between predators and prey. Spatio-temporal habitat structure in temporary wetland ecosystems is particularly variable because of fluctuations in water levels and vegetation colonisation dynamics. Demographic characteristics within animal populations may also alter the influence of habitat structure on biotic interactions, but have remained untested. Here, we inv...
Salvelinus namaycush spawning substratum attracts egg predators and opportunists through chemosensory cuesNARA Subscribed
Two separate field experiments were conducted in a series of small boreal lakes to test for the attraction of egg predators to lake trout Salvelinus namaycush spawning shoals and subsequently to determine whether chemosensory cues attract egg predators to these sites. In the first experiment, minnow traps set on spawning sites captured significantly more egg predators than those set on structurally similar non‐spawning sites....
The nuclear ribosomal internal transcribed spacer ( ITS ) region is the formal fungal barcode and in most cases the marker of choice for the exploration of fungal diversity in environmental samples. Two problems are particularly acute in the pursuit of satisfactory taxonomic assignment of newly generated ITS sequences: (i) the lack of an inclusive, reliable public reference data set and (ii) the lack of means to refer to funga...
Extreme weather events can have negative impacts on species survival and community structure when surpassing lethal thresholds. Extreme winter warming events in the A rctic rapidly melt snow and expose ecosystems to unseasonably warm air (2–10 °C for 2–14 days), but returning to cold winter climate exposes the ecosystem to lower temperatures by the loss of insulating snow. Soil animals, which play an integral part in soil proc...
Ecosystem responses to increased precipitation and permafrost decay in subarctic Sweden inferred from peat and lake sedimentsNARA Subscribed
Recent accelerated decay of discontinuous permafrost at the Stordalen Mire in northern Sweden has been attributed to increased temperature and snow depth, and has caused expansion of wet minerotrophic areas leading to significant changes in carbon cycling in the mire. In order to track these changes through time and evaluate potential forcing mechanisms, this paper analyses a peat succession and a lake sediment sequence from w...
Effects of experimentally imposed climate scenarios on flowering phenology and flower production of subarctic bog speciesNARA Subscribed
Climate scenarios for high‐latitude areas predict not only increased summer temperatures, but also larger variation in snowfall and winter temperatures. By using open‐top chambers, we experimentally manipulated both summer temperatures and winter and spring snow accumulations and temperatures independently in a blanket bog in subarctic Sweden, yielding six climate scenarios. We studied the effects of these scenarios on floweri...
Symposia lecturesNARA Subscribed
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