P.J. Meredith results 64
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E122Q rhodopsin: pigment microspectrophotometry, photoreceptor light responses, and bleaching adaptationNARA Subscribed
When the rhodopsin visual pigment of vertebrate rods absorbs light, photoisomerization of its 11- cis retinal chromophore to all-trans retinal triggers a conformational change, ultimately leading to the formation of metarhodopsin II (meta II), the active signalling state. Meta II initiates the phototransduction cascade, culminating in membrane hyperpolarization. To investigate how meta II lifetime shapes the rod photoresponse,...
Observations and model studies suggest that front dynamics can enhance phytoplankton productivity. This study tested whether frontal systems also increase the abundance of nitrifying microbes and nitrogen recycling during repeat sampling transects across the Mid‐Atlantic Bight shelfbreak in July 2019. We measured ammonium concentrations, nitrate dual isotopes (δ 15 N, δ 18 O), and ammonia monooxygenase subunit A ( amoA ) genes...
Dominance and rarity in tree communities across the globe: Patterns, predictors and threatsNARA Subscribed
Aim Ecological and anthropogenic factors shift the abundances of dominant and rare tree species within local forest communities, thus affecting species composition and ecosystem functioning. To inform forest and conservation management it is important to understand the drivers of dominance and rarity in local tree communities. We answer the following research questions: (1) What are the patterns of dominance and rarity in tree...
Dense, cold waters formed on Antarctic continental shelves descend along the Antarctic continental margin, where they mix with other Southern Ocean waters to form Antarctic Bottom Water (AABW). AABW then spreads into the deepest parts of all major ocean basins, isolating heat and carbon from the atmosphere for centuries. Despite AABW’s key role in regulating Earth’s climate on long time scales and in recording Southern Ocean c...
Environment and shipping drive environmental DNA beta‐diversity among commercial portsNARA Subscribed
The spread of nonindigenous species by shipping is a large and growing global problem that harms coastal ecosystems and economies and may blur coastal biogeographical patterns. This study coupled eukaryotic environmental DNA (eDNA) metabarcoding with dissimilarity regression to test the hypothesis that ship‐borne species spread homogenizes port communities. We first collected and metabarcoded water samples from ports in Europe...
We contend that ocean turbulent fluxes should be included in the list of Essential Ocean Variables (EOVs) created by the Global Ocean Observing System. This list aims to identify variables that are essential to observe to inform policy and maintain a healthy and resilient ocean. Diapycnal turbulent fluxes quantify the rates of exchange of tracers (such as temperature, salinity, density or nutrients, all of which are already EO...
Glacial meltwater is an important environmental variable for ecosystem dynamics along the biologically productive Western Antarctic Peninsula (WAP) shelf. This region is experiencing rapid change, including increasing glacial meltwater discharge associated with the melting of land ice. To better understand the WAP environment and aid ecosystem forecasting, additional methods are needed for monitoring and quantifying glacial me...
Unsupervised classification identifies coherent thermohaline structures in the Weddell Gyre regionOA Marine
The Weddell Gyre is a major feature of the Southern Ocean and an important component of the planetary climate system; it regulates air–sea exchanges, controls the formation of deep and bottom waters, and hosts upwelling of relatively warm subsurface waters. It is characterised by low sea surface temperatures, ubiquitous sea ice formation, and widespread salt stratification that stabilises the water column. Observing the Weddel...
Seasonal cycling in carbon, alkalinity, and nutrients in landfast sea ice in Hangar Cove, Adelaide Island, West Antarctic Peninsula, were investigated during winter, spring, and summer 2014–2015. Temporal dynamics were driven by changes in the sea‐ice physicochemical conditions, ice‐algal community composition, and organic matter production. Winter sea ice was enriched with dissolved inorganic carbon (DIC) and inorganic nutrie...
Common, low-frequency, rare, and ultra-rare coding variants contribute to COVID-19 severityNARA Subscribed
The combined impact of common and rare exonic variants in COVID-19 host genetics is currently insufficiently understood. Here, common and rare variants from whole-exome sequencing data of about 4000 SARS-CoV-2-positive individuals were used to define an interpretable machine-learning model for predicting COVID-19 severity. First, variants were converted into separate sets of Boolean features, depending on the absence or the pr...
The Southern Ocean supports ecosystem services that are important on a global scale. Climate change and human activities (tourism, fishing, and research) will affect both the demand for, and the provision of, these services into the future. Here we synthesize recent assessments of the current status and expected future climate-driven changes in Southern Ocean ecosystems and evaluate the potential consequences of these changes...
Annual patterns in phytoplankton phenology in Antarctic coastal waters explained by environmental driversNARA Subscribed
Coastal zones of Antarctica harbor rich but highly variable phytoplankton communities. The mechanisms that control the dynamics of these communities are not well defined. Here we elucidate the mechanisms that drive seasonal species succession, based on algal photophysiological characteristics and environmental factors. For this, phytoplankton community structure together with oceanographic parameters was studied over a 5‐year...
The OceanGliders program started in 2016 to support active coordination and enhancement of global glider activity. OceanGliders contributes to the international efforts of the Global Ocean Observation System (GOOS) for Climate, Ocean Health, and Operational Services. It brings together marine scientists and engineers operating gliders around the world: (1) to observe the long-term physical, biogeochemical, and biological ocean...
The Western Antarctic Peninsula (WAP), one of the most productive regions of the Southern Ocean, is currently undergoing rapid environmental changes such as ocean acidification (OA) and increased daily irradiances from enhanced surface‐water stratification. To assess the potential for future biological CO 2 sequestration of this region, we incubated a natural phytoplankton assemblage from Ryder Bay, WAP, under a range of pCO 2...
A test of genomic modularity among life‐history adaptations promoting speciation with gene flowNARA Subscribed
Speciation with gene flow may require adaptive divergence of multiple traits to generate strong ecologically based reproductive isolation. Extensive negative pleiotropy or physical linkage of genes in the wrong phase affecting these diverging traits may therefore hinder speciation, while genetic independence or “modularity” among phenotypic traits may reduce constraints and facilitate divergence. Here, we test whether the gene...