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A quantitative comparison of tools for monitoring the abundance of crown-of-thorns starfish and coral coverNARA Subscribed
Effective monitoring of crown-of-thorns starfish (COTS) populations and coral cover is critical for informing management of COTS outbreaks throughout their tropical Indo-Pacific range, including Australia’s Great Barrier Reef. However, existing monitoring tools such as manta tow and cull diver surveys have well-known limitations including accuracy and resource demands. This study evaluates a range of monitoring tools for asses...
Despite extensive research on the western Pacific crown-of-thorns starfish (CoTS; Acanthaster cf. solaris ), especially from Australia’s Great Barrier Reef (GBR), there are persistent knowledge gaps that constrain understanding and management. Given renewed population irruptions of CoTS on the GBR, alongside escalating climate impacts and direct anthropogenic pressures, a quantitative assessment of knowledge gaps was undertake...
This study presents field measurements for a non-conventional mobile square cylinder fish enclosure, with permeable ends, evaluated under both towed and moored conditions at a semi-open ocean test site. Novelty lies within the enclosure design that enables both mobility and control of internal flow through the incorporation of an adjustable aft-end perimeter constriction to regulate internal flow and support fish welfare by en...
The Sarasota bottlenose dolphin community as a proving ground for delphinid tagging technologyOA Marine
A 55+ year-long study of bottlenose dolphins ( Tursiops truncatus ) residing in Sarasota Bay on the west coast of Florida, USA, has supported the evolution of tags that address an expanding array of scientific questions while improving the welfare of tagged animals. Most individual dolphins from this community are identifiable from dorsal fin marks or freeze branding and are regularly resighted, which facilitates our ability t...
Population Genomics of a Cosmopolitan Weed Provides Insights Into Its Local Adaptation and Recent Demographic HistoryNARA Subscribed
Invasive plant species present a growing ecological and economic challenge, and often adapt rapidly to their novel environments through complex demographic and evolutionary processes. Invasion genomics offers powerful tools to disentangle these processes, but most studies rely on geographically narrow sampling across native and non‐native ranges. Erigeron canadensis is a cosmopolitan weed native to North America that has succe...
Interpretable deep learning reveals spatiotemporal MRI features of brain aging that align with neurodegenerationNARA Subscribed
Cortical thinning and atrophy are hallmarks of brain aging that have been characterized using magnetic resonance imaging (MRI). Brain aging involves many neuroanatomic features whose effects on brain structure remain unexplored. To address this challenge, we trained interpretable deep neural networks (DNNs) to estimate brain age (BA) from T 1 -weighted ( T 1 w) MRI. By identifying MRI features unapparent to humans, DNNs can fi...
SNAPSHOT USA 2024: Year 6 of the Coordinated National Camera Trap Survey of the United StatesNARA Subscribed
Motivation SNAPSHOT USA is an annual, multi‐contributor camera trap survey of mammals across the United States. The growing SNAPSHOT USA dataset is intended for tracking the spatial and temporal responses of mammal populations to changes in land use, land cover and climate. These data will be useful for exploring the drivers of spatial and temporal changes in relative abundance and distribution, as well as the impacts of speci...
Quantifying animal movements is necessary for answering a wide array of research questions in ecology and conservation biology. Consequently, ecologists have made considerable efforts to identify the best way to estimate an animal's home range, and many methods of estimating home ranges have arisen over the past half a century. Most of these methods fall into two distinct categories of estimators that have only recently been d...
Introduction Picocyanobacteria from the genera Prochlorococcus and Synechococcus thrive across the globe in aquatic environments, have relatively small genomes, and have growth dynamics regulated by both viral interactions and abiotic conditions, making them excellent model organisms for exploring host-pathogencoevolution. Methods We developed and refined methods to sample and sequence cyanobacteria, cyanophages, and measured...
Alzheimer’s disease (AD) disproportionately affects women and carriers of the apolipoprotein E ε4 allele (APOE4), yet little is known about how sex and APOE interact to influence white matter (WM) integrity during disease progression. We integrated diffusion MRI and matched blood transcriptomic data to investigate these interactions and their underlying biological mechanisms. WM microstructure was quantified using diffusion te...