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Molecular Ecology · 2025 · Vol. 34 · Issue 15 · Wiley
Suaeda salsa L. is a typical halophyte with high value as a vegetable. Here, we report a 447.98 Mb, chromosomal‐level genome of S. salsa , assembled into nine pseudomolecules (contig N50 = 1.36 Mb) and annotated with 27,927 annotated protein‐coding genes. Most of the assembled S. salsa genome, 58.03%, consists of transposable elements. Some gene families including HKT1 , NHX , SOS and CASP related to salt resistance were signi...
Global Change Biology · 2024 · Vol. 30 · Issue 10 · Wiley
Inorganic carbon is an important component of soil carbon stocks, exerting a profound influence on climate change and ecosystem functioning. Drylands account for approximately 80% of the global soil inorganic carbon (SIC) pool within the top 200 cm. Despite its paramount importance, the components of SIC and their contributions to CO 2 fluxes have been largely overlooked, resulting in notable gaps in understanding its distribu...
Global Change Biology · 2024 · Vol. 30 · Issue 1 · Wiley
Carbon allocation has been fundamental for long‐lived trees to survive cold stress at their upper elevation range limit. Although carbon allocation between non‐structural carbohydrate (NSC) storage and structural growth is well‐documented, it still remains unclear how ongoing climate warming influences these processes, particularly whether these two processes will shift in parallel or respond divergently to warming. Using a co...
Global Change Biology · 2023 · Vol. 29 · Issue 12 · Wiley
Trees at their upper range limits are highly sensitive to climate change, and thus alpine treelines worldwide have changed their recruitment patterns in response to climate warming. However, previous studies focused only on daily mean temperature, neglecting the asymmetric influences of daytime and nighttime warming on recruitments in alpine treelines. Here, based on the compiled dataset of tree recruitment series from 172 alp...
Global Change Biology · 2021 · Vol. 27 · Issue 11 · Wiley
Paddy soils make up the largest anthropogenic wetlands on earth, and are characterized by a prominent potential for organic carbon (C) sequestration. By quantifying the plant‐ and microbial‐derived C in soils across four climate zones, we identified that organic C accrual is achieved via contrasting pathways in paddy and upland soils. Paddies are 39%–127% more efficient in soil organic C (SOC) sequestration than their adjacent...
Environmental Microbiology · 2021 · Vol. 23 · Issue 3 · Wiley
Summary Type II toxin‐antitoxin (TA) systems modulate many essential cellular processes in prokaryotic organisms. Recent studies indicate certain type II antitoxins also transcriptionally regulate other genes, besides neutralizing toxin activity. Herein, we investigated the diverse transcriptional repression properties of type II TA antitoxin PaHigA from Pseudomonas aeruginosa . Biochemical and functional analyses showed that...
Environmental Microbiology · 2021 · Vol. 23 · Issue 2 · Wiley
Summary As the most abundant and genetically diverse biological entities, viruses significantly influence ecological, biogeographical and evolutionary processes in the ocean. However, the biogeography of marine viruses and the drivers shaping viral community are unclear. Here, the biogeographic patterns of T4‐like viruses and the relative impacts of deterministic (environmental selection) and dispersal (spatial distance) proce...
Journal of Fish Diseases · 2020 · Vol. 43 · Issue 2 · Wiley
Pure bacterial cultures were isolated from different tissues of moribund Megalobrama terminalis from a high mortality event that occurred at a farm in Foshan, China. Two isolates (F2 and F3) were identified as Streptococcus dysgalactiae subsp. dysgalactiae based on morphological and biochemical detection as well as molecular analysis. In brain heart infusion broth, the best growth conditions of isolate F3 were 35ºC, salinity 5...
Environmental Microbiology · 2017 · Vol. 19 · Issue 10 · Wiley
Summary The ADP ribosylation factor (Arf) and the coat protein complex I (COPI) are involved in vesicle transport. Together with GTPase‐activating proteins (ArfGAPs) and guanine exchange factors (ArfGEFs) that regulate the activity of Arf, they govern vesicle formation, COPI trafficking and the maintenance of the Golgi complex. In an ongoing effort to study the role of membrane trafficking in pathogenesis of the rice blast fun...
Environmental Microbiology · 2014 · Vol. 16 · Issue 7 · Wiley
Summary The bacterial phytopathogen X anthomonas campestris pv. campestris ( Xcc ) relies on the hrp (hypersensitive response and pathogenicity) genes to cause disease and induce hypersensitive response ( HR ). The hrp genes of bacterial phytopathogens are divided into two groups. Xcc hrp genes belong to group II . It has long been known that the group II hrp genes are activated by an AraC ‐type transcriptional regulator whose...
Global Change Biology · 2013 · Vol. 19 · Issue 3 · Wiley
Understanding the dynamics and underlying mechanism of carbon exchange between terrestrial ecosystems and the atmosphere is one of the key issues in global change research. In this study, we quantified the carbon fluxes in different terrestrial ecosystems in China, and analyzed their spatial variation and environmental drivers based on the long‐term observation data of China FLUX sites and the published data from other flux si...