Rui-Rui Luo results 18
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We herein constructed a phylogeny of Lepidoptera synthesizing multiple information types, a phylogenomics backbone, a multigene supermatrix with species‐comprehensive DNA barcodes, and topological information from a compiled database of standardized machine‐readable trees from over 100 previous studies. We then applied the new phylogenetic synthesis as a profiling framework for a large DNA barcode dataset of caterpillars from...
Proteome profile analysis reveals regulatory mechanisms in the liver of Carassius auratus under short‐term salinity stress (10‰, 48 h)NARA Subscribed
Carassius auratus , a commercially important species in the ornamental aquarium industry, is sensitive to salinity fluctuations. In this study, 30 C. auratus of length 13.1 ± 2.9 cm and weight 103.8 ± 40.8 g/fish were placed into six plastic tanks (80 L) with five fish per tank. About 15 fish were exposed to 10‰ salinity for 48 h, while another 15 fish were kept in freshwater and continuously aerated (0‰) as a control. To inve...
A New Species of Diaporthe Section Betulicola (Diaporthomycetidae, Diaporthales) From ChinaNARA Subscribed
A new species in Diaporthaceae, Diaporthe fengtaiensis sp. nov., is described and illustrated from Southwestern China. A comparative morpho‐anatomical study and multilocus phylogenetic analysis (ITS, CAL , HIS , TEF1‐α , TUB2 ) confirmed its position within the section Betulicola of the genus Diaporthe . The taxon is characterized by immersed ascomata (270–420 × 290–410 µm), relatively large asci (70–115 × 9.5–13.5 µm), and 1‐...
Harmful dinoflagellates are widely distributed in coastal waters worldwide, posing multiple ecological and socioeconomic threats. Climate change may alter the biogeography of these species; however, few studies have linked shifts in harmful dinoflagellates' ecological distribution to their socioeconomic impacts. This study developed a framework to assess the spatiotemporal ecological–social risks posed by harmful dinoflagellat...
Motivation Functional diversity is an important dimension of biodiversity. In animals, most species have complex life cycles, such that the same species can display great differences in traits and ecological roles across different life history stages. Consequently, the patterns and driving factors of functional diversity can vary considerably among the different life stages. However, research on stages other than adults is rar...
Monsoon Climate and Anthropogenic Influences Shape Primate Distributions Across the Southeastern Edge of the Qinghai‐Tibet PlateauNARA Subscribed
The southeastern edge of the Qinghai‐Tibet Plateau (Yunnan, China) exhibits high biodiversity but stark differences in species richness between its western Longitudinal Range Gorge (LRG) and eastern Yunnan Plateau (YP). We collected distribution data for 16 primate species in Yunnan and analyzed palynological records over the past 20 ka from 21 localities to identify the biogeographic, climatic, and anthropogenic factors that...
In this work, we describe a new species of the genus Oreonectes , Oreonectes yuedongensis sp. nov., collected from the Lianhua Mountains in eastern Guangdong, China. Phylogenetic trees constructed based on the mitochondrial cytochrome b ( Cyt b ) gene showed that this new species represents an independent evolutionary lineage, with uncorrected genetic distances (Kimura 2‐parameter model) from congeners ranging from 5.1% to 8.3...
Inorganic carbon is an important component of soil carbon stocks, exerting a profound influence on climate change and ecosystem functioning. Drylands account for approximately 80% of the global soil inorganic carbon (SIC) pool within the top 200 cm. Despite its paramount importance, the components of SIC and their contributions to CO 2 fluxes have been largely overlooked, resulting in notable gaps in understanding its distribu...
Biotic exchanges between Taiwan and Mainland China have shaped the biodiversity and ecosystems of both regions. Exchanges from Mainland China to Taiwan have received more attention, mainly studied in terrestrial vertebrates, while the reverse direction and invertebrates have largely been overlooked. Here, we explore the dispersal events between these two regions based on the moths of three species groups of Obeidia , including...
Summary Aspergillus flavus is an opportunistic fungal pathogen that colonizes agriculture crops with aflatoxin contamination. We found that Perillaldehyde (PAE) effectively inhibited A . flavus viability and aflatoxin production by inducing excess reactive oxygen species (ROS). Transcriptome analysis indicated that the Gα protein FadA was significantly induced by PAE. Functional characterization of FadA showed it is important...
Pseudomonas aeruginosa antitoxin HigA functions as a diverse regulatory factor by recognizing specific pseudopalindromic DNA motifsNARA Subscribed
Summary Type II toxin‐antitoxin (TA) systems modulate many essential cellular processes in prokaryotic organisms. Recent studies indicate certain type II antitoxins also transcriptionally regulate other genes, besides neutralizing toxin activity. Herein, we investigated the diverse transcriptional repression properties of type II TA antitoxin PaHigA from Pseudomonas aeruginosa . Biochemical and functional analyses showed that...
Culturing novel and abundant pelagiphages in the oceanNARA Subscribed
Summary Viruses play a key role in biogeochemical cycling and host mortality, metabolism, physiology and evolution in the ocean. Viruses that infect the globally abundant SAR11 bacteria (pelagiphages) were reported to be an important component of the marine viral communities. Our current knowledge of pelagiphages is based on a few studies and therefore is limited. In this study, 10 new pelagiphages were isolated and genomicall...
Unprecedented levels of nitrogen (N) have been deposited in ecosystems over the past century, which is expected to have cascading effects on microbially mediated soil respiration ( SR ). Extracellular enzymes play critical roles on the degradation of soil organic matter, and measurements of their activities are potentially useful indicators of SR . The links between soil extracellular enzymatic activities ( EEA s) and SR under...
Quaternary palaeoenvironmental oscillations drove the evolution of the Eurasian Carassius auratus complex (Cypriniformes, Cyprinidae)NARA Subscribed
Aim We sought to reconstruct the spatio‐temporal genetic diversification in goldfish of the Carassius auratus complex, which is widely distributed in Eurasia, to test whether vicariance events or human‐mediated translocations best explained lineage divergence and genogeographical history. Location East Asia and the Oriental islands including Japan, the Ryukyus and Taiwan, and Europe, including Russia and the Czech Republic. Me...
Effects of warming and grazing on soil N availability, species composition, and ANPP in an alpine meadowNARA Subscribed
Uncertainty about the effects of warming and grazing on soil nitrogen (N) availability, species composition, and aboveground net primary production (ANPP) limits our ability to predict how global carbon sequestration will vary under future warming with grazing in alpine regions. Through a controlled asymmetrical warming (1.2/1.7°C during daytime/nighttime) with a grazing experiment from 2006 to 2010 in an alpine meadow, we fou...
Diversity, abundance and characterization of ruminal cysteine phytases suggest their important role in phytate degradationNARA Subscribed
Summary A novel class of cysteine phytase showing ability to degrade phytate has recently been isolated from rumen bacteria. To expand our knowledge of this enzyme class, a total of 101 distinct cysteine phytase gene fragments were identified from the ruminal genomic DNA of Bore goats and Holstein cows, and most of them shared low identities (
Summary Haemophilus parasuis is the aetiological agent of Glässer's disease, which has received more attention in the past decade due to the increasing economic losses in the pig industry worldwide. Little is known about the mechanisms by which H. parasuis survives in the host. In this study, selective capture of transcribed sequences (SCOTS) was used to identify H. parasuis genes upregulated in necrotic porcine lung 7 days po...
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