Soham Ray - NARA Discovery

CRISP-PTG-Assembler Ver. 1.0: a primer design tool for polycistronic tRNA-gRNA (PTG) assembly for Cas9-based multiplex genome editing in plantsNARA Subscribed

Planta · 2026 · Vol. 263 · Issue 6 · Springer

Soham Ray; Joshitha Vijayan; S. Vanchinathan; Rajkumar Dhakar; Nazima Nasrullah; Shivani Nagar; Tushar Kanti Dutta; Viswanthan Chinnusamy

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Hormone-optimized hypocotyl–epicotyl–cotyledonary tri-complex explant system enables efficient soybean transformation with reduced genotype dependenceNARA Subscribed

Plant Cell Reports · 2026 · Vol. 45 · Issue 6 · Springer

J. Sushmitha; Durgeshwari Prabhakar Gadpayale; Navita Bansal; Ranjeet R. Kumar; G. Rama Prashat; Shivani Nagar; Soham Ray; Ashish Marathe; R. Dinesh Kumar; Akshay Talukdar; Giriraj Kumawat; Viswanathan Chinnusamy; Suneha Goswami; T. Vinutha

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Assimilation of cis-1,2-dichloroethene by aerobic 1,4-dioxane-metabolizing bacterium Pseudonocardia dioxanivorans CB1190NARA Subscribed

Journal of Hazardous Materials · 2026 · Vol. 507 · Elsevier

Ivy Y. Kwok; Pia Ramos; Himadri Bose; Glenn Nurwono; Soham Ray; Sara Kuang; Junyoung O. Park; Shaily Mahendra

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Multivariate and nonlinear analyses to characterize phenotypic variability in landraces and cultivars of rice (Oryza sativa L.)NARA Subscribed

Plant Physiology Reports · 2026 · Vol. 31 · Issue 1 · Springer

Soham Hazra; Debarpita Datta Ray; Abhisek Hazra; Avishek Chatterjee; Ankur Mukhopadhyay; Subhadwip Ghorai; Pabitra Kumar Ghosh; Suvojit Bose; Sourav Roy; Tina Nath; Sabuj Ghosh; Deep Pal; Rahul De; Supriya Dey; Maman Khatun; Poulomi Sen

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A robust 1K-core marker set for wild germplasm management and targeted pre-breeding of rice: development and applicationsNARA Subscribed

Theoretical and Applied Genetics · 2026 · Vol. 139 · Issue 1 · Springer

Debashree Dalai; Dipti Ranjan Pani; Swayamsiddha Aswita Dhal; Motilal Behera; Tapan Kumar Mondal; Muhammad Azaharudheen TP; Joshitha Vijayan; Deepa Sarkar; Pallavi Ghose; Abhijeet Roy; Kutubuddin A Molla; Anilkumar C; Lotan Kumar Bose; Trilochan Mohapatra; Soham Ray; Meera Kumari Kar; Mridul Chakraborti

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Optimized Agrobacterium-mediated CRISPR/Cas9 transformation in soybean through comparative evaluation of cotyledonary node and half-seed explantsNARA Subscribed

Plant Cell, Tissue and Organ Culture (PCTOC) · 2025 · Vol. 163 · Issue 3 · Springer

Durgeshwari Prabhakar Gadpayale; J. Sushmita; Navita Bansal; Shalini Singh; Ch Prasanna Kumari; C. R. Nagesh; Ranjeet Ranjan Kumar; G. Rama Prashat; Shivani Nagar; Soham Ray; R. Dinesh Kumar; Arun Kumar; Akshya Talukdar; Aashish Marathe; Giriraj Kumawat; Viswanathan Chinnusamy; T. Vinutha; Suneha Goswami

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Identification of potential genes for susceptibility in rice-Magnaporthe oryzae interactionNARA Subscribed

Journal of Plant Biochemistry and Biotechnology · 2025 · Vol. 34 · Issue 4 · Springer

Joshitha Vijayan; Soham Ray; Sourabh Kumar Jain; Priyanka Jain; Nagendra Kumar Singh; Tilak Raj Sharma

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Genome-wide association study on root traits under non-stress and osmotic stress conditions to improve drought tolerance in rice (Oryza sativa Lin.)NARA Subscribed

Acta Physiologiae Plantarum · 2025 · Vol. 47 · Issue 1 · Springer

Akshay Sureshrao Sakhare; Sudhir Kumar; Ranjith K. Ellur; G. D. Prahalada; Suneetha Kota; Ranjeet Ranjan Kumar; Soham Ray; Baidya Nath Mandal; Viswanathan Chinnusamy

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The status of the CRISPR/Cas9 research in plant–nematode interactionsNARA Subscribed

Planta · 2023 · Vol. 258 · Issue 6 · Springer

Tushar K. Dutta; Soham Ray; Victor Phani

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Magnaporthe oryzae encoded effector protein AvrPi54 interacts in vivo with rice encoded cognate resistance protein Pi54 at the host plasma membraneNARA Subscribed

Journal of Plant Biochemistry and Biotechnology · 2023 · Vol. 32 · Issue 2 · Springer

Banita Kumari Saklani; Soham Ray; Kirti Arora; Ravi Kumar Asthana; Tilak Raj Sharma

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Comparative transcriptome profiling reveals the basis of differential sheath blight disease response in tolerant and susceptible rice genotypesNARA Subscribed

Protoplasma · 2022 · Vol. 259 · Issue 1 · Springer

Pankajini Samal; Kutubuddin A. Molla; Archana Bal; Soham Ray; Harekrushna Swain; Ansuman Khandual; Pritiranjan Sahoo; Motilal Behera; Sarika Jaiswal; Asif Iquebal; Mridul Chakraborti; Lambodar Behera; Meera K. Kar; Arup K. Mukherjee

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Genetic Dissection of Component Traits for Salinity Tolerance at Reproductive Stage in RiceNARA Subscribed

Plant Molecular Biology Reporter · 2021 · Vol. 39 · Issue 2 · Springer

Krishnendu Chattopadhyay; Sangram Keshori Mohanty; Joshitha Vijayan; Bishnu Charan Marndi; Ananta Sarkar; Kutubuddin Ali Molla; Koushik Chakraborty; Soham Ray; Ramani Kumar Sarkar

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The core set of sequence-tagged microsatellite sites markers between halophytic wild rice Oryza coarctata and Oryza sativa complexNARA Subscribed

Euphytica · 2021 · Vol. 217 · Issue 4 · Springer

Debashree Dalai; Mridul Chakraborti; Tapan Kumar Mondal; Soham Ray; Meera Kumari Kar; Koushik Chakraborty; Dipti Ranjan Pani; Sutapa Sarkar; Lotan Kumar Bose; Motilal Behera; Krishnendu Chattopadhyay; Deepa; Joshitha Vijayan; Sushanta Kumar Dash; Chinmay Pradhan; Bhaskar Chandra Patra; Bishnu Charan Marndi

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Genetic analysis of downy mildew resistance and identification of molecular markers linked to resistance gene Ppa207 on chromosome 2 in cauliflowerNARA Subscribed

Euphytica · 2020 · Vol. 216 · Issue 11 · Springer

Partha Saha; Chandrika Ghoshal; Soham Ray; Namita Das Saha; Mohita Srivastava; Pritam Kalia; B. S. Tomar

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Stable quantitative trait locus (QTL) for sheath blight resistance from rice cultivar CR 1014NARA Subscribed

Euphytica · 2020 · Vol. 216 · Issue 11 · Springer

Archana Bal; Pankajini Samal; Mridul Chakraborti; Arup Kumar Mukherjee; Soham Ray; Kutubuddin A. Molla; Lambodar Behera; Rashmita Samal; Sarmistha Sarangi; Pritiranjan Sahoo; Motilal Behera; Srikanta Lenka; T. P. Muhammed Azharudheen; Ansuman Khandual; Meera Kumari Kar

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Ionic selectivity and coordinated transport of Na+ and K+ in flag leaves render differential salt tolerance in rice at the reproductive stageNARA Subscribed

Planta · 2019 · Vol. 250 · Issue 5 · Springer

Koushik Chakraborty; Krishnendu Chattaopadhyay; Lopamudra Nayak; Soham Ray; Lucina Yeasmin; Priyanka Jena; Sunanda Gupta; Sangram K. Mohanty; Padmini Swain; Ramani K. Sarkar

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Novel biotic stress responsive candidate gene based SSR (cgSSR) markers from riceNARA Subscribed

Euphytica · 2019 · Vol. 215 · Issue 2 · Springer

Kutubuddin Ali Molla; T. P. Muhammed Azharudheen; Soham Ray; Sutapa Sarkar; Alaka Swain; Mridul Chakraborti; Joshitha Vijayan; Onkar Nath Singh; Mirza Jaynul Baig; Arup Kumar Mukherjee

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Development of RAPD and ISSR derived SCAR markers linked to Xca1Bo gene conferring resistance to black rot disease in cauliflower (Brassica oleracea var. botrytis L.)NARA Subscribed

Euphytica · 2017 · Vol. 213 · Issue 10 · Springer

Pritam Kalia; Partha Saha; Soham Ray

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Development and validation of cross-transferable and polymorphic DNA markers for detecting alien genome introgression in Oryza sativa from Oryza brachyanthaNARA Subscribed

Molecular Genetics and Genomics · 2016 · Vol. 291 · Issue 4 · Springer

Soham Ray; Lotan K. Bose; Joshitha Ray; Umakanta Ngangkham; Jawahar L. Katara; Sanghamitra Samantaray; Lambodar Behera; Mahender Anumalla; Onkar N. Singh; Meingsheng Chen; Rod A. Wing; Trilochan Mohapatra

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