Stephen Baker results 75
· Newest (Page 1/3, per page 25)
Author: Stephen Baker ×Clear All Filters
Search Results
Technical mitigation measures to reduce the bycatch of sharks: there is no silver bulletNARA Subscribed
Incidental catch (bycatch) of sharks in commercial fisheries is driving global population declines. In this review we assess the efficacy of a comprehensive list of technical bycatch mitigation measures for all major commercial fishing gears. We structured our review around the three stages of capture where opportunities exist to mitigate bycatch: preventing capture; increasing escape probability; and decreasing at-vessel/post...
The hyperiid amphipod Brachyscelus rapacoides is a warm-water species associated with gelatinous zooplankton. In the Mediterranean it has been reported in association with Rhopilema nomadica in both Israel and Turkey. Here, we document the first record of B. rapacoides in Greek waters, representing the first confirmed record for Europe, based on both morphological examination and DNA barcoding of the mitochondrial COI gene. Sp...
Interpretable deep learning reveals spatiotemporal MRI features of brain aging that align with neurodegenerationNARA Subscribed
Cortical thinning and atrophy are hallmarks of brain aging that have been characterized using magnetic resonance imaging (MRI). Brain aging involves many neuroanatomic features whose effects on brain structure remain unexplored. To address this challenge, we trained interpretable deep neural networks (DNNs) to estimate brain age (BA) from T 1 -weighted ( T 1 w) MRI. By identifying MRI features unapparent to humans, DNNs can fi...
Alzheimer’s disease (AD) disproportionately affects women and carriers of the apolipoprotein E ε4 allele (APOE4), yet little is known about how sex and APOE interact to influence white matter (WM) integrity during disease progression. We integrated diffusion MRI and matched blood transcriptomic data to investigate these interactions and their underlying biological mechanisms. WM microstructure was quantified using diffusion te...
Dynamics of Respired Dissolved Organic Carbon in a StreamNARA Subscribed
Small Pelagic Fish (SPF) exhibit large fluctuations in abundance and distribution in response to environmental variability. To maintain the resilience of fishing communities and develop effective and equitable climate adaptation strategies, improved understanding of how the fishing industry responds to spatio-temporal shifts within and across SPF populations is of critical importance. In this paper, we examine the responses of...
Aim There is compelling evidence that drivers and patterns of biodiversity and ecosystem functioning vary across multiple spatial scales, from global to regional, landscape and patch. However, macroecological processes impacting freshwater biodiversity are poorly understood compared to marine and terrestrial ecosystems. Despite step changes in data availability, we have a fragmented view beyond the local scale of how hydrologi...
Predicting the progression of MCI and Alzheimer’s disease on structural brain integrity and other features with machine learningNARA Subscribed
Machine learning (ML) on structural MRI data shows high potential for classifying Alzheimer’s disease (AD) progression, but the specific contribution of brain regions, demographics, and proteinopathy remains unclear. Using Alzheimer’s Disease Neuroimaging Initiative (ADNI) data, we applied an extreme gradient-boosting algorithm and SHAP (SHapley Additive exPlanations) values to classify cognitively normal (CN) older adults, th...
Temperature and oxygen levels drive the evolution of morphological, behavioral, and physiological traits in marine invertebrates, including crustaceans. Environmental conditions are also expected to prompt the adaptive evolution of mitochondrial protein-coding genes (PCGs), which are vital for energy production via the oxidative phosphorylation pathway. We formally tested for adaptive evolution in mitochondrial protein-coding...
Declining physical function with aging is associated with structural and functional brain network organization. Gaining a greater understanding of network associations may be useful for targeting interventions that are designed to slow or prevent such decline. Our previous work demonstrated that the Short Physical Performance Battery (eSPPB) score and body mass index (BMI) exhibited a statistical interaction in their associati...