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Bayesian hierarchical stock–recruitment models for setting conservation limits for Atlantic salmon stocks in ScotlandNARA Subscribed
Atlantic salmon ( Salmo salar L.) populations in Scotland are subject to active management and conservation practices which require biological reference points (BRPs), specifically conservation limits, defined at the level of the stock. Acquiring the data necessary to independently derive these BRPs for all managed populations in Scotland is prohibitive, motivating the use of Bayesian hierarchical stock–recruitment models. The...
Global Analysis of Shallow Underwater Fish Observation Research: 70 Years of Progress, Persistent Geographic Biases and a Path ForwardNARA Subscribed
Marine ecosystems are increasingly threatened by overfishing, pollution, coastal development and climate change, underscoring the need for long‐term, representative information on key fish populations and habitats to inform management and policy. Underwater fish observation (UFObs) techniques, such as Underwater Visual Census (UVC), stereo‐Baited Remote Underwater Video (stereo‐BRUV) and Remotely Operated Vehicles (ROVs), play...
Refining methods for attributing health impacts to climate change: a heat-mortality case study in ZürichNARA Subscribed
Heat-related deaths occur throughout the summer months, peak during heatwaves, and are affected by temperature and exposed populations’ sensitivities to meteorological conditions. Previous studies found that climate change is increasing heat-related mortality worldwide. We build on existing epidemiological methods to shed light on the adverse effects of climate change on human health. We address limitations in existing methods...
Biotic Mechanisms Strengthen Functional and Phylogenetic Convergence of Reef Fish Assemblages at Higher LatitudesNARA Subscribed
Aim How communities of organisms come together has long fascinated scientists, with renewed interest in using functional and evolutionary patterns to infer mechanisms of community assembly. Ecological theory predicts that biotic interactions could lead to either divergence in the event of niche partitioning or convergence through the exclusion of competitively inferior species, but most macroecological studies attribute the la...
Consistent Unimodal Body Length Distributions in Hundreds of Reef Fishes Across Diverse Life HistoriesNARA Subscribed
Animal body size distributions result from interactions of growth, mortality and recruitment. In ecology and fisheries science, theoretical models of fish body size distributions are widely used but rely on life‐history parameters—growth coefficient (K) and natural mortality rate (M)—that remain unknown for most species and are challenging to estimate. Analysing data from underwater visual surveys and exhaustive sampling, repr...
Motivation Here, we make available a second version of the BioTIME database, which compiles records of abundance estimates for species in sample events of ecological assemblages through time. The updated version expands version 1.0 of the database by doubling the number of studies and includes substantial additional curation to the taxonomic accuracy of the records, as well as the metadata. Moreover, we now provide an R packag...
Contrasting Population Trajectories of Temperate Reef Fishes and Invertebrates Following Seasonal and Multi‐Decadal Temperature ChangeNARA Subscribed
Temperature perturbations from climate change affect ecosystems through short‐term pulse events, such as heatwaves, and chronic long‐term shifts. Temperate rocky reef ecosystems have been observed to show substantial ecological change as a result of short‐term temperature fluctuations, but the longer‐term impacts of temperature change remain poorly understood. Here, we investigate temperate reef fishes and mobile invertebrates...
Motivation Pollinators play a crucial role in maintaining Earth's terrestrial biodiversity. However, rapid human‐induced environmental changes are compromising the long‐term persistence of plant‐pollinator interactions. Unfortunately, we lack robust, generalisable data capturing how plant‐pollinator communities are structured across space and time. Here, we present the EuPPollNet (European Plant‐Pollinator Networks) database,...
Fish and invertebrate communities show greater day–night partitioning on tropical than temperate reefsNARA Subscribed
Diel partitioning of animals within ecological communities is widely acknowledged, yet rarely quantified. Investigation of most ecological patterns and processes involves convenient daylight sampling, with little consideration of the contributions of nocturnal taxa, particularly in marine environments. Here we assess diel partitioning of reef faunal assemblages at a continental scale utilizing paired day and night visual censu...
Aim Ecological state shifts that alter the structure and function of entire ecosystems are a concerning consequence of human impact. Yet, when, where and why discrete ecological states emerge remains difficult to predict and monitor, especially in high‐diversity systems. We sought to quantify state shifts and their drivers through space and time in the most ecologically complex marine ecosystem: tropical coral reefs. Location...
Changes to virus taxonomy and the ICTV Statutes ratified by the International Committee on Taxonomy of Viruses (2024)NARA Subscribed
This article reports changes to virus taxonomy and taxon nomenclature that were approved and ratified by the International Committee on Taxonomy of Viruses (ICTV) in April 2024. The entire ICTV membership was invited to vote on 203 taxonomic proposals that had been approved by the ICTV Executive Committee (EC) in July 2023 at the 55th EC meeting in Jena, Germany, or in the second EC vote in November 2023. All proposals were ra...
Defining an ageing-related pathology, disease or syndrome: International Consensus StatementNARA Subscribed
Around the world, individuals are living longer, but an increased average lifespan does not always equate to an increased health span. With advancing age, the increased prevalence of ageing-related diseases can have a significant impact on health status, functional capacity and quality of life. It is therefore vital to develop comprehensive classification and staging systems for ageing-related pathologies, diseases and syndrom...
Reading tea leaves worldwide: Decoupled drivers of initial litter decomposition mass‐loss rate and stabilizationNARA Subscribed
The breakdown of plant material fuels soil functioning and biodiversity. Currently, process understanding of global decomposition patterns and the drivers of such patterns are hampered by the lack of coherent large‐scale datasets. We buried 36,000 individual litterbags (tea bags) worldwide and found an overall negative correlation between initial mass‐loss rates and stabilization factors of plant‐derived carbon, using the Tea...
Population estimates are required for effective conservation of many rare marine species, but can be difficult to obtain. The critically endangered red handfish ( Thymichthys politus ) is a coastal anglerfish known only from two fragmented populations in southeast Tasmania, Australia. It is at a high risk of extinction due to low numbers, loss of habitat, and the impacts of climate change. To aid conservation efforts, we provi...