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Global Analysis of Shallow Underwater Fish Observation Research: 70 Years of Progress, Persistent Geographic Biases and a Path ForwardNARA Subscribed
Marine ecosystems are increasingly threatened by overfishing, pollution, coastal development and climate change, underscoring the need for long‐term, representative information on key fish populations and habitats to inform management and policy. Underwater fish observation (UFObs) techniques, such as Underwater Visual Census (UVC), stereo‐Baited Remote Underwater Video (stereo‐BRUV) and Remotely Operated Vehicles (ROVs), play...
Disease outbreak data to inform decision-making: the role of disease spread models in the Lao P.D.R. African Swine Fever epidemic, 2019NARA Subscribed
Understanding the spread of African Swine Fever (ASF) between villages in the southeast-Asian, low − middle income country context is critical if this high impact disease is to be controlled by good policy and effective field activities in these resource-poor settings. Using governmental reporting data from the 2019 outbreak of ASF in Lao People’s Democratic Republic, spatial clustering techniques were used to identify cluster...
Novel estimation of African swine fever transmission parameters within smallholder villages in Lao P.D.RNARA Subscribed
African Swine Fever (ASF) disease transmission parameters are crucial for making response and control decisions when faced with an outbreak, yet they are poorly quantified for smallholder and village contexts within Southeast Asia. Whilst disease-specific factors − such as latent and infectious periods − should remain reasonably consistent, host, environmental and management factors are likely to affect the rate of disease spr...
Geophysical reconstruction of the late Holocene proximal proglacial landsystem at Skeiðarársandur, southeast IcelandNARA Subscribed
Sandur plains are extensive sedimentary bodies formed in proglacial settings by glaciofluvial processes. Icelandic sandar have been hypothesised to be comprised of thick alluvial successions that provide critical insight into the processes that contributed to their formation and evolution. However, to‐date, most sandar research has focused on the analysis of sedimentary successions associated to topographically‐confined and sm...
Extensive regional variation in the phenology of insects and their response to temperature across N orth A mericaNARA Subscribed
Climate change models often assume similar responses to temperatures across the range of a species, but local adaptation or phenotypic plasticity can lead plants and animals to respond differently to temperature in different parts of their range. To date, there have been few tests of this assumption at the scale of continents, so it is unclear if this is a large‐scale problem. Here, we examined the assumption that insect taxa...
Prolonging survival in good health is a fundamental societal goal. However, the leading determinants of disability-free survival in healthy older people have not been well established. Data from ASPREE, a bi-national placebo-controlled trial of aspirin with 4.7 years median follow-up, was analysed. At enrolment, participants were healthy and without prior cardiovascular events, dementia or persistent physical disability. Disab...
Common, low-frequency, rare, and ultra-rare coding variants contribute to COVID-19 severityNARA Subscribed
The combined impact of common and rare exonic variants in COVID-19 host genetics is currently insufficiently understood. Here, common and rare variants from whole-exome sequencing data of about 4000 SARS-CoV-2-positive individuals were used to define an interpretable machine-learning model for predicting COVID-19 severity. First, variants were converted into separate sets of Boolean features, depending on the absence or the pr...
NET-VISA from Cradle to Adulthood. A Machine-Learning Tool for Seismo-Acoustic Automatic AssociationNARA Subscribed
A research concept that was first presented on a poster at a Comprehensive Nuclear-Test-Ban Treaty (CTBT) conference in 2009 has resulted in a fully-fledged operational software product named NET-VISA (Network Processing Vertically Integrated Seismic Analysis), which performs the Network Processing step of the automatic processing at the International Data Centre (IDC). It has become one of the tools of the waveform analysts t...
Association mapping of malting quality traits in UK spring and winter barley cultivar collectionsNARA Subscribed
Key message Historical malting quality data was collated from UK national and recommended list trial data and used in a GWAS. 25 QTL were identified, with the majority from spring barley cultivar sets. Abstract In Europe, the most economically significant use of barley is the production of malt for use in the brewing and distilling industries. As such, selection for traits related to malting quality is of great commercial inte...
Article impact statement : New collaborations with accounting research can improve conservation impact of ecosystem‐based information systems.
Explaining ecosystem multifunction with evolutionary modelsNARA Subscribed
Ecosystem function is the outcome of species interactions, traits, and niche overlap – all of which are influenced by evolution. However, it is not well understood how the tempo and mode of niche evolution can influence ecosystem function. In evolutionary models where either species differences accumulate through random drift in a single trait or species differences accumulate through divergent selection among close relatives,...
Translating local benthic community structure to national biogenic reef habitat typesNARA Subscribed
Aim Marine reef habitats are typically defined subjectively. We provide a continental‐scale assessment of dominant reef habitats through analysis of macroalgae and sessile animal taxa at sites distributed around Australia. Relationships between reef habitats and environmental and anthropogenic factors are assessed, and potential changes in the future distribution and persistence of habitats are considered. Location Shallow roc...
Aim MacArthur and Wilson's theory of island biogeography proposes that the rate at which species colonize an island depends on the island's isolation (distance effect), whereas the local extinction rate depends on its area (area effect). Alternative hypotheses recognize that area can affect the colonization rate (target effect) and that isolation can affect the extinction rate (rescue effect) and, moreover, that these relation...
Habitat loss is the principal threat to species. How much habitat remains—and how quickly it is shrinking—are implicitly included in the way the International Union for Conservation of Nature determines a species’ risk of extinction. Many endangered species have habitats that are also fragmented to different extents. Thus, ideally, fragmentation should be quantified in a standard way in risk assessments. Although mapping fragm...