Yu-Rong Chen results 13
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Bacterial community dynamics underlie ecosystem functioning in river networks, yet how different bacterial lifestyles respond to bottom‐up biotic drivers under confluence‐induced hydraulics remains unclear. Here, we quantified spatial heterogeneity in free‐living (FL), particle‐associated (PA) and sedimentary (S) bacterial assemblages, coupled with phytoplankton and extracellular enzyme profiles, at the Yellow River‐Fenhe Rive...
Infection by Enterocytozoon hepatopenaei (EHP) leads to stunted or arrested growth in shrimp, causing significant economic losses in shrimp aquaculture. In this study, the spore wall protein EhSW12 was expressed using a prokaryotic expression system. Subsequently, phage display technology was employed to screen for peptides that interact with EhSW12. A rapid detection method was developed that bypasses the laborious procedure...
Phylogeography of a Small Mammal ( Blarinella quadraticauda ) Distributed Around the Sichuan Basin, Southwest ChinaNARA Subscribed
The rapid climatic fluctuations and geographical factors during the Quaternary glacial period, particularly in the Pleistocene epoch, play a pivotal role in shaping intraspecific genetic diversity. We conducted an investigation into the genetic structure and speciation mechanisms of a small mammal species, Asiatic Short‐Tailed Shrew ( Blarinella quadraticauda ), which is mainly distributed in the mountains surrounding the Sich...
Evaluating SINGV ‐ RCM for Long‐Term High‐Resolution Climate Simulations Over Southeast AsiaNARA Subscribed
Long‐term convection‐permitting dynamical downscaling has been carried out over Southeast Asia and the Western Maritime Continent, using the Singapore Regional Climate Model (SINGV‐RCM) at 8 and 2 km spatial resolutions, respectively. SINGV‐RCM is forced with ERA5 reanalysis data for 36 years (1979–2014) at 8 km resolution over Southeast Asia (79E‐160E; 16S‐24N) with a regular update of the sea surface temperature at 6‐h inter...
Surface soils are highly vulnerable to multiple global change stressors associated with climate change and human activity; however, whether the impacts of this increasing number of stressors penetrate deeper soils remains virtually unknown. Here, we conducted a continental‐scale survey of soil profiles (0–100 cm). Results showed that multiple stressors jointly affect multiple soil functions (from soil carbon sequestration to p...
Genetic diversity is vital for population survival, yet there is a paucity of studies focusing on the effectiveness of establishing protected areas for maintaining the population genetic diversity of threatened plant species. To evaluate the effectiveness of in situ conservation measures, we used simple sequence repeats (SSR) and single nucleotide polymorphisms (SNP) markers to monitor temporal dynamics in genetic diversity of...
Climatic seasonality challenges the stability of microbial‐driven deep soil carbon accumulation across ChinaNARA Subscribed
Microbial residues contribute to the long‐term stabilization of carbon in the entire soil profile, helping to regulate the climate of the planet; however, how sensitive these residues are to climatic seasonality remains virtually unknown, especially for deep soils across environmental gradients. Here, we investigated the changes of microbial residues along soil profiles (0–100 cm) from 44 typical ecosystems with a wide range o...
The secondary metabolite regulator, BbSmr1 , is a central regulator of conidiation via the BrlA‐AbaA‐WetA pathway in Beauveria bassianaNARA Subscribed
Summary The filamentous fungus Beauveria bassiana , an insect fungal pathogen, is widely used for pest biocontrol. Aerial conidia are infectious propagules, and their yield and viability greatly affect the field application of this fungus; however, little is known about the molecular regulatory mechanism of the triggered conidiation. In the present study, we find that the secondary metabolite regulator BbSmr1 is involved in th...
Vibrio rotiferianus is an important marine pathogen of various aquatic organisms and can be found widely distributed in the marine environment. To further characterize this pathogen, the pathogenic properties and genome of V. rotiferianus SSVR1601 isolated from Sebastes schlegelii with skin ulcer were analysed. SSVR1601 was shown to be short rod‐shaped cell with a single polar flagellum. Different degrees of pathological chang...
Diversity of herbaceous plants and bacterial communities regulates soil resistome across forest biomesNARA Subscribed
Summary Antibiotic resistance is ancient and prevalent in natural ecosystems and evolved long before the utilization of synthetic antibiotics started, but factors influencing the large‐scale distribution patterns of natural antibiotic resistance genes (ARGs) remain largely unknown. Here, a large‐scale investigation over 4000 km was performed to profile soil ARGs, plant communities and bacterial communities from 300 quadrats ac...
Summary To what extent the genomes of different species belonging to one genus can be diverse and the relationship between genomic differentiation and environmental factor remain unclear for oceanic bacteria. With many new bacterial genera and species being isolated from marine environments, this question warrants attention. In this study, we sequenced all the type strains of the published species of G laciecola , a recently d...
Strengthening of paleo‐typhoon and autumn rainfall in Taiwan corresponding to the Southern Oscillation at late HoloceneNARA Subscribed
The purpose of this study is to improve prehistoric knowledge of paleo‐typhoon and winter monsoon activity in the western North Pacific after 8 cal. ka BP. We examine two sediment cores derived from lakes located to the south and north of the Ilan Plain in northeastern Taiwan. Seasonal and typhoon rainfall data over the past several decades are collected for this study region. We also use mineral indicators, K/Rb ratios and gr...
Spatial and temporal variation of phenological growing season and climate change impacts in temperate eastern ChinaNARA Subscribed
Using phenological and normalized difference vegetation index (NDVI) data from 1982 to 1993 at seven sample stations in temperate eastern China, we calculated the cumulative frequency of leaf unfolding and leaf coloration dates for deciduous species every 5 days throughout the study period. Then, we determined the growing season beginning and end dates by computing times when 50% of the species had undergone leaf unfolding and...
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