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Brown trout ( Salmo trutta L.) are ecologically and economically important, but like many salmonids their populations are declining. Trout exhibit a high level of phenotypic plasticity, ranging from freshwater residency to anadromy. This complexity causes problems for assessment and constrains application of adult catch‐based assessment methods that are commonly applied to other species such as Atlantic salmon. Juvenile method...
Discovery of a novel emaravirus and an alphacytorhabdovirus infecting Spiraea in the USANARA Subscribed
Spiraea plants showing symptoms of virus infection were investigated using high-throughput sequencing which resulted in the identification of two novel viruses: an emaravirus named Spiraea chlorotic leaf spot distortion virus (SCLSDV), and an alphacytorhabdovirus named Spiraea alphacytorhabdovirus 1 (SpCRV-1). The complete genome of SCLSDV comprises four RNA segments, each encoding a distinct protein: RNA-dependent RNA polymer...
Precision measurement of the Ds*+-Ds+ meson mass differenceNARA Subscribed
Interpretable deep learning reveals spatiotemporal MRI features of brain aging that align with neurodegenerationNARA Subscribed
Cortical thinning and atrophy are hallmarks of brain aging that have been characterized using magnetic resonance imaging (MRI). Brain aging involves many neuroanatomic features whose effects on brain structure remain unexplored. To address this challenge, we trained interpretable deep neural networks (DNNs) to estimate brain age (BA) from T 1 -weighted ( T 1 w) MRI. By identifying MRI features unapparent to humans, DNNs can fi...
Diversification and Colonisation in the Indo‐Australian Archipelago: Genomic Insights From Colubrid SnakesNARA Subscribed
Aim The Indo‐Australian Archipelago (IAA) is one of the most geologically complex and species‐rich regions on Earth. However, our knowledge of the geological processes and dispersal mechanisms that generate archipelago‐wide distributions across the IAA is limited to a few vertebrate groups and often solely attributed to Plio‐Pleistocene sea‐level fluctuations. In this study, we use phylogenomics‐based analyses to investigate t...
Alzheimer’s disease (AD) disproportionately affects women and carriers of the apolipoprotein E ε4 allele (APOE4), yet little is known about how sex and APOE interact to influence white matter (WM) integrity during disease progression. We integrated diffusion MRI and matched blood transcriptomic data to investigate these interactions and their underlying biological mechanisms. WM microstructure was quantified using diffusion te...
Complete genome sequence of citrus tristeza virus isolate PB61, a commercially deployed mild strain for cross-protection in grapefruitNARA Subscribed
Citrus tristeza virus (CTV; species Closterovirus tristezae ) is ubiquitous in Australia, occurring in all production areas. Stem-pitting disease in white grapefruit varieties caused by CTV is managed by mild strain cross-protection. However, the protective isolate of CTV used for cross-protection, labelled PB61, is not fully characterised at the molecular level, even though most grapefruit budwood is inoculated with this viru...
Micro‐Refuges or Ecological Traps: Context‐Dependent Effects of Rock Pools on Intertidal Biodiversity Across LatitudesNARA Subscribed
Aim We investigated how local‐scale environmental heterogeneity influences biodiversity patterns across broad biogeographic gradients, using intertidal microhabitats as a model system within one of the most environmentally stressful ecosystems on Earth. Location Intertidal habitats at 26 locations (two rocky shore sites per location) across six continents, spanning 98° of latitude (38°S to 60°N). Time Period 2019–2022. Major T...
Human‐induced landscape modifications and climate change are forcing wildlife into closer contact with humans as the availability of natural habitats decreases. Although the importance of anthropogenic structures for the conservation of species is widely recognized, negative narratives surrounding bats may impede conservation efforts in human‐dominated landscapes. We conducted a global systematic literature review to summarize...
Loss of soil organic carbon (SOC) from farmland is a key threat to the capacity of soils to provide ecosystem services and exacerbates climate change. In alignment with a published protocol, we conducted a review and meta-analysis of time series of SOC measurements in long-term agricultural experiments to study absolute SOC changes under different agricultural management regimes. Our results show that SOC in the upper 30 cm la...
A Scoping Review of Mosquito Vector Range Shifts: Widespread Expansions and Evidence Gaps in Climate AttributionNARA Subscribed
As global temperatures rise, concerns about shifting mosquito ranges—and accompanying changes in the transmission of malaria, dengue, and other diseases—are mounting. However, systematic evidence for climate‐driven changes in mosquito ranges remains limited. We conducted a scoping review following PRISMA ‐ ScR guidelines of studies documenting expansions or contractions in medically important mosquito species. In total, 178 st...