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Field measurements reveal local limits of imputed functional traits in tropical treesNARA Subscribed
This study evaluated the reliability of functional data imputed in the classification of ecological strategies according to the CSR model (competitive, stress-tolerant, ruderal) in tree species of a riparian Atlantic Forest in Brazil. Empirical data collected in situ from 68 species were compared with data imputed using the Bayesian Hierarchical Probabilistic Matrix Factorization (BHPMF) technique, considering key functional a...
Oceanographic parameters associated with spatial occurrence of cephalopods in standardized demersal fishing trawls in the NE AtlanticNARA Subscribed
In this work, the environmental occurrence ranges of different European cephalopod species are described for the whole NE Atlantic shelf including the greater North Sea and Baltic Sea. This is done based on the environmental parameters collected in-situ during surveys that caught commercially important cephalopod species (1990–2022). Results are supplemented and compared with information available in the published literature a...
The gut microbiome is a dynamic ecosystem wherein microbes can exert beneficial, neutral or harmful effects on their host organism. Previous research has supported a large role for the environment in shaping avian gut microbiome diversity, but host‐specific factors that regulate gut microbiome variation remain elusive. In hybrid zones, genetic recombination shuffles divergent alleles among backcrossed individuals allowing asso...
Interpretable deep learning reveals spatiotemporal MRI features of brain aging that align with neurodegenerationNARA Subscribed
Cortical thinning and atrophy are hallmarks of brain aging that have been characterized using magnetic resonance imaging (MRI). Brain aging involves many neuroanatomic features whose effects on brain structure remain unexplored. To address this challenge, we trained interpretable deep neural networks (DNNs) to estimate brain age (BA) from T 1 -weighted ( T 1 w) MRI. By identifying MRI features unapparent to humans, DNNs can fi...
Addressing urgent conservation issues, such as the drastic declines of North American migratory birds, requires creative, evidence‐based, efficient, and collaborative approaches. The abundance of over 50% of monitored North American shorebird populations has declined by over 50% since 1980. To address these declines, we developed a partnership of scientists and practitioners called the Shorebird Science and Conservation Collec...
Alzheimer’s disease (AD) disproportionately affects women and carriers of the apolipoprotein E ε4 allele (APOE4), yet little is known about how sex and APOE interact to influence white matter (WM) integrity during disease progression. We integrated diffusion MRI and matched blood transcriptomic data to investigate these interactions and their underlying biological mechanisms. WM microstructure was quantified using diffusion te...
Marine megafauna species are affected by a wide range of anthropogenic threats. To evaluate the risk of such threats, species’ vulnerability to each threat must first be determined. We build on the existing threats classification scheme and ranking system of the International Union for Conservation of Nature (IUCN) Red List of Threatened Species by assessing the vulnerability of 256 marine megafauna species to 23 at‐sea threat...
Predicting the progression of MCI and Alzheimer’s disease on structural brain integrity and other features with machine learningNARA Subscribed
Machine learning (ML) on structural MRI data shows high potential for classifying Alzheimer’s disease (AD) progression, but the specific contribution of brain regions, demographics, and proteinopathy remains unclear. Using Alzheimer’s Disease Neuroimaging Initiative (ADNI) data, we applied an extreme gradient-boosting algorithm and SHAP (SHapley Additive exPlanations) values to classify cognitively normal (CN) older adults, th...
Observed and projected changes in snow accumulation and snowline in California’s snowy mountainsNARA Subscribed
The Sierra Nevada and Southern Cascades—California’s snowy mountains—are primary freshwater sources and natural reservoirs for the states of California and Nevada. These mountains receive precipitation overwhelmingly from wintertime storms including atmospheric rivers (ARs), much of it falling as snow at the higher elevations. Using a seven-decade record of daily observed temperature and precipitation as well as a snow reanaly...
Cephalopods, a gap in the European Marine Strategy Framework Directive and their future integrationNARA Subscribed
With the aim of maintaining or obtaining good environmental status in the Northeast Atlantic and northern Mediterranean Sea, the European Marine Strategy Framework Directive (EU-MSFD) came into force in 2008. All EU Member States (MS) have the task of assessing the current state of their adjacent waters to guarantee sustainable use of marine resources and healthy ecosystems for the current and future generations. Although the...
Identifying and correcting biases in localized downscaling estimates of daily precipitation return valuesNARA Subscribed
Extreme precipitation events are a major cause of economic damage and disruption, and need to be addressed for increasing resilience to a changing climate, particularly at the local scale. Practitioners typically want to understand local changes at spatial scales much smaller than the native resolution of most Global Climate Models, for which downscaling techniques are used to translate planetary-to-regional scale change infor...
Hot and cold flavors of southern California’s Santa Ana winds: their causes, trends, and links with wildfireNARA Subscribed
Santa Ana winds (SAWs) are associated with anomalous temperatures in coastal Southern California (SoCal). As dry air flows over SoCal’s coastal ranges on its way from the elevated Great Basin down to sea level, all SAWs warm adiabatically. Many but not all SAWs produce coastal heat events. The strongest regionally averaged SAWs tend to be cold. In fact, some of the hottest and coldest observed temperatures in coastal SoCal are...
Quantitative Systems Pharmacology Modeling of Avadomide-Induced Neutropenia Enables Virtual Clinical Dose and Schedule Finding StudiesNARA Subscribed
Avadomide is a cereblon E3 ligase modulator and a potent antitumor and immunomodulatory agent. Avadomide trials are challenged by neutropenia as a major adverse event and a dose-limiting toxicity. Intermittent dosing schedules supported by preclinical data provide a strategy to reduce frequency and severity of neutropenia; however, the identification of optimal dosing schedules remains a clinical challenge. Quantitative system...