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Interpretable deep learning reveals spatiotemporal MRI features of brain aging that align with neurodegenerationNARA Subscribed
Cortical thinning and atrophy are hallmarks of brain aging that have been characterized using magnetic resonance imaging (MRI). Brain aging involves many neuroanatomic features whose effects on brain structure remain unexplored. To address this challenge, we trained interpretable deep neural networks (DNNs) to estimate brain age (BA) from T 1 -weighted ( T 1 w) MRI. By identifying MRI features unapparent to humans, DNNs can fi...
The transformation-mainstreaming conundrum: Making sense of tensions in adaptation practiceNARA Subscribed
As the scale of climate change impacts become apparent, organisations globally are seeking to adapt. They face dual imperatives of transformation—going beyond business-as-usual to embrace disruptive changes to their decision-making processes—and mainstreaming—enacting adaptation initiatives with minimal change to existing capabilities and structures. In practice, these important imperatives can conflict, leading to the emergen...
Purpose In Australia, cervical screening is usually offered face-to-face through primary care. As self-collection offers flexibility in how and where screening can be accessed, we assessed participant preferences for flexible screening models. Methods We recruited women and people with a cervix aged 24–74 years into a national survey (December 2023–April 2024) via a paid Meta campaign and community networks. Sociodemographic f...
Alzheimer’s disease (AD) disproportionately affects women and carriers of the apolipoprotein E ε4 allele (APOE4), yet little is known about how sex and APOE interact to influence white matter (WM) integrity during disease progression. We integrated diffusion MRI and matched blood transcriptomic data to investigate these interactions and their underlying biological mechanisms. WM microstructure was quantified using diffusion te...
Site-specific variability in recovery of Caribbean sponge communities following two category-5 hurricanesNARA Subscribed
Coral reefs worldwide are increasingly subjected to multiple disturbances, including storm events, thermal anomalies, disease outbreaks and more localized stressors. Climate change is predicted to increase the frequency and severity of tropical cyclones. In 2017, an unprecedented event of two Category 5 hurricanes in rapid succession occurred on St. Thomas, United States Virgin Islands. Short-term monitoring (2.5 months after...
Predicting the progression of MCI and Alzheimer’s disease on structural brain integrity and other features with machine learningNARA Subscribed
Machine learning (ML) on structural MRI data shows high potential for classifying Alzheimer’s disease (AD) progression, but the specific contribution of brain regions, demographics, and proteinopathy remains unclear. Using Alzheimer’s Disease Neuroimaging Initiative (ADNI) data, we applied an extreme gradient-boosting algorithm and SHAP (SHapley Additive exPlanations) values to classify cognitively normal (CN) older adults, th...
Studies of the resident community of bottlenose dolphins ( Tursiops truncatus ) of Sarasota Bay, Florida, have been conducted for more than 50 years. Detailed histories have been collected for resident individuals through integrated observations, systematic photographic identification surveys, tagging and tracking, catch-and-release health assessments, remote biopsy sampling, and stranding response. This has produced a unique...
Tissue fibrosis following tendon injury is a major clinical problem due to the increased risk of re-injury and limited treatment options; however, its mechanism remains unclear. Evidence suggests that insufficient resolution of inflammation contributes to fibrotic healing by disrupting tenocyte activity, with the NF-κB pathway being identified as a potential mediator. Equine embryonic stem cell (ESC) derived tenocytes may offe...
We investigated how Interleukin 1 beta (IL-1β) impacts equine tenocyte function and global gene expression in vitro and determined if these effects could be rescued by pharmacologically inhibiting nuclear factor-κB (NF- K B) or interleukin 1 signalling. Equine superficial digital flexor tenocytes were cultured in three-dimensional (3D) collagen gels and stimulated with IL-1β for two-weeks, with gel contraction and interleukin...
Harassment and killing of porpoises (“phocoenacide”) by fish‐eating Southern Resident killer whales ( Orcinus orca )NARA Subscribed
Endangered Southern Resident killer whales ( Orcinus orca ) are fish‐eaters that preferentially prey on adult Chinook salmon ( Oncorhynchus tshawytscha ). Despite being salmon specialists, individuals from all three killer whale pods (J, K, L) have been observed harassing and killing porpoises (family Phocoenidae) without consuming them. Retrospectively, we identified and analyzed 78 episodes of Southern Resident killer whales...
Timely detection and understanding of causes for population decline are essential for effective wildlife management and conservation. Assessing trends in population size has been the standard approach, but we propose that monitoring population health could prove more effective. We collated data from 7 bottlenose dolphin ( Tursiops trun catus) populations in the southeastern United States to develop a method for estimating surv...
Tendon injuries occur commonly in both human and equine athletes, and poor tendon regeneration leads to functionally deficient scar tissue and an increased frequency of re-injury. Despite evidence suggesting inadequate resolution of inflammation leads to fibrotic healing, our understanding of the inflammatory pathways implicated in tendinopathy remains poorly understood, meaning successful targeted treatments are lacking. Here...
Density-impact functions for invasive house mouse (Mus musculus) effects on indigenous lizards and invertebratesNARA Subscribed
House mice are among the most widely distributed mammals in the world, and adversely affect a wide range of indigenous biota. Suppressing mouse populations, however, is difficult and expensive. Cost-effective suppression requires knowing how low to reduce mouse numbers to achieve biodiversity outcomes, but these targets are usually unknown or not based on evidence. We derived density-impact functions (DIFs) for mice and small...
Applying Mendelian randomization to appraise causality in relationships between nutrition and cancerNARA Subscribed
Dietary factors are assumed to play an important role in cancer risk, apparent in consensus recommendations for cancer prevention that promote nutritional changes. However, the evidence in this field has been generated predominantly through observational studies, which may result in biased effect estimates because of confounding, exposure misclassification, and reverse causality. With major geographical differences and rapid c...