Jason B. Allen results 31
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An experimental approach to assess the combined effects of multiple stressors on a large vertebrate speciesNARA Subscribed
The design of experiments to investigate the combined effects of multiple stressors requires exposing target organisms to multiple combinations of stressor doses. Concurrent manipulation of stressors is often infeasible with wildlife, but long‐lasting health effects allow individual health to be used as an integrator of prior stressor exposure. The population of bottlenose dolphins in Barataria Bay, Louisiana, experienced long...
Several legal acts mandate that management agencies regularly assess biological populations. For species with distinct markings, these assessments can be conducted noninvasively via capture‐recapture and photographic identification (photo‐ID), which involves processing considerable quantities of photographic data. To ease this burden, agencies increasingly rely on automated identification (ID) algorithms. Identification algori...
Pre‐existing phytoplankton biomass concentrations shape coastal plankton response to fire‐generated ash leachateNARA Subscribed
Climate‐driven warming is projected to intensify wildfires, increasing their frequency and severity globally. Wildfires are an increasingly significant source of atmospheric deposition, delivering nutrients, organic matter, and trace metals to coastal and open ocean waters. These inputs have the potential to fertilize or inhibit microbial growth, yet their ecological impacts remain poorly understood. This study examines how as...
Motivation Here, we make available a second version of the BioTIME database, which compiles records of abundance estimates for species in sample events of ecological assemblages through time. The updated version expands version 1.0 of the database by doubling the number of studies and includes substantial additional curation to the taxonomic accuracy of the records, as well as the metadata. Moreover, we now provide an R packag...
Status of truffle science and cultivation in North AmericaNARA Subscribed
Background Truffles are subterranean fungal fruiting bodies that are highly prized for their culinary value. Cultivation of truffles was pioneered in Europe and has been successfully adapted in temperate regions throughout the globe. Truffle orchards have been established in North America since the 1980s, and while some are productive, there are still many challenges that must be overcome to develop a viable North American tru...
Studies of the resident community of bottlenose dolphins ( Tursiops truncatus ) of Sarasota Bay, Florida, have been conducted for more than 50 years. Detailed histories have been collected for resident individuals through integrated observations, systematic photographic identification surveys, tagging and tracking, catch-and-release health assessments, remote biopsy sampling, and stranding response. This has produced a unique...
SNAPSHOT USA 2019–2023: The First Five Years of Data From a Coordinated Camera Trap Survey of the United StatesNARA Subscribed
Motivation SNAPSHOT USA is an annual, multicontributor camera trap survey of mammals across the United States. The growing SNAPSHOT USA dataset is intended for tracking the spatial and temporal responses of mammal populations to changes in land use, land cover and climate. These data will be useful for exploring the drivers of spatial and temporal changes in relative abundance and distribution, as well as the impacts of specie...
SNAPSHOT USA 2021: A third coordinated national camera trap survey of the U nited S tatesNARA Subscribed
SNAPSHOT USA is a multicontributor, long‐term camera trap survey designed to survey mammals across the United States. Participants are recruited through community networks and directly through a website application ( https://www.snapshot-usa.org/ ). The growing Snapshot dataset is useful, for example, for tracking wildlife population responses to land use, land cover, and climate changes across spatial and temporal scales. Her...
Timely detection and understanding of causes for population decline are essential for effective wildlife management and conservation. Assessing trends in population size has been the standard approach, but we propose that monitoring population health could prove more effective. We collated data from 7 bottlenose dolphin ( Tursiops trun catus) populations in the southeastern United States to develop a method for estimating surv...
Deep diving by offshore bottlenose dolphins ( Tursiops spp.)NARA Subscribed
We used satellite‐linked tags to evaluate dive behavior in offshore bottlenose dolphins ( Tursiops spp.) near the island of Bermuda. The data provide evidence that bottlenose dolphins commonly perform both long (>272 s) and deep (>199 m) dives, with the deepest and longest dives being to 1,000 m and 826 s (13.8 min), respectively. The data show a relationship between dive duration and dive depth for dives longer than about 272...
Human‐wildlife interactions (HI) are becoming more prevalent with increasing human population. These interactions could have important eco‐evolutionary consequences that become apparent only after observing populations for multiple generations. Here, we analyzed 28 years (1993–2020) of data from the world's longest‐running study of a wild dolphin population to assess the fitness consequences of HI on common bottlenose dolphins...
High‐resolution dive depth and acceleration recordings from nearshore (Sarasota Bay, dive depth Tursiops spp.) were used to estimate the diving metabolic rate (DMR) and the locomotor metabolic rate (LMR, L O 2 /min) during three phases of diving (descent, bottom, and ascent). For shallow dives (depth ≤ 30 m), we found no differences between the two ecotypes in the LMR during diving, nor during the postdive shallow interval bet...
SNAPSHOT USA 2020: A second coordinated national camera trap survey of the United States during the COVID ‐19 pandemicNARA Subscribed
Managing wildlife populations in the face of global change requires regular data on the abundance and distribution of wild animals, but acquiring these over appropriate spatial scales in a sustainable way has proven challenging. Here we present the data from Snapshot USA 2020, a second annual national mammal survey of the USA. This project involved 152 scientists setting camera traps in a standardized protocol at 1485 location...
Prolonging survival in good health is a fundamental societal goal. However, the leading determinants of disability-free survival in healthy older people have not been well established. Data from ASPREE, a bi-national placebo-controlled trial of aspirin with 4.7 years median follow-up, was analysed. At enrolment, participants were healthy and without prior cardiovascular events, dementia or persistent physical disability. Disab...
Photographic-identification (photo-ID) of bottlenose dolphins using individually distinctive features on the dorsal fin is a well-established and useful tool for tracking individuals; however, this method can be labor-intensive, especially when dealing with large catalogs and/or infrequently surveyed populations. Computer vision algorithms have been developed that can find a fin in an image, characterize the features of the fi...
Seventy five percent of the world's food crops benefit from insect pollination. Hence, there has been increased interest in how global change drivers impact this critical ecosystem service. Because standardized data on crop pollination are rarely available, we are limited in our capacity to understand the variation in pollination benefits to crop yield, as well as to anticipate changes in this service, develop predictions, and...
Runaway evolution from male‐male competitionNARA Subscribed
Wondrously elaborate weapons and displays that appear to be counter to ecological optima are widespread features of male contests for mates across the animal kingdom. To understand how such diverse traits evolve, here we develop a quantitative genetic model of sexual selection for a male signaling trait that mediates aggression in male‐male contests and show that an honest indicator of aggression can generate selection on itse...
Population models, such as those used for Population Viability Analysis (PVA), are valuable for projecting trends, assessing threats, guiding environmental resource management, and planning species conservation measures. However, rarely are the needed data on all aspects of the life history available for cetacean species, because they are long-lived and difficult to study in their aquatic habitats. We present a detailed assess...
Small cetaceans face persistent threats from fisheries interactions, making effective mitigation a priority for conservation. In southwest Florida, interactions come primarily from small-scale recreational hook and line and trap/pot fisheries, with regional stranding network partners working with federal agency managers to assess and intervene as possible in cases of live animal entanglement. Evaluating success of intervention...
Motivation The BioTIME database contains raw data on species identities and abundances in ecological assemblages through time. These data enable users to calculate temporal trends in biodiversity within and amongst assemblages using a broad range of metrics. BioTIME is being developed as a community‐led open‐source database of biodiversity time series. Our goal is to accelerate and facilitate quantitative analysis of temporal...
Animals can be important in modulating ecosystem‐level nutrient cycling, although their importance varies greatly among species and ecosystems. Nutrient cycling rates of individual animals represent valuable data for testing the predictions of important frameworks such as the Metabolic Theory of Ecology ( MTE ) and ecological stoichiometry ( ES ). They also represent an important set of functional traits that may reflect both...